RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 E9PCH4 1651 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 IRS4O14654 1257 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 CUL4BQ13620 913 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 DAAM2Q86T65 1068 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC125Q86Z20 511 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 BRF1Q92994 677 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 RTL1A6NKG5 1358 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 RIOK3O14730 519 aaKnown RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 OPA1O60313 960 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 AKNAD1Q5T1N1 836 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 HAUS3Q68CZ6 603 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC110Q8TBZ0 833 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC87Q9NVE4 849 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 MTRF1LQ9UGC7 380 aaKnown RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 ERBB4Q15303 1308 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 KRT5P13647 590 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 PKD2L1Q9P0L9 805 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 MAGEB6Q8N7X4 407 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 FAM204AQ9H8W3 233 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 BRD2P25440 801 aaKnown RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 UBE2HP62256 183 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 NIM1KQ8IY84 436 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 SPC25Q9HBM1 224 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 MTUS1Q9ULD2 1270 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 NR1I2O75469 434 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 DNM2P50570 870 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 GNG11P61952 73 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 SRGAP1Q7Z6B7 1085 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 RHPN1Q8TCX5 695 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 C16orf45Q96MC5 204 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-202ENST00000356435 ZBED4O75132 1171 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 KSR2Q6VAB6 950 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 TRIM7Q9C029 511 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 ZBTB40Q9NUA8 1239 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 GGA1Q9UJY5 639 aa6.22□□□□□ -1.41
PTPRD-202ENST00000356435 SSFA2P28290 1259 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 GAS2L3Q86XJ1 694 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 AGTPBP1Q9UPW5 1226 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 FLT4P35916 1363 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 MAP3K5Q99683 1374 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 HMGB1P1B2RPK0 211 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-202ENST00000356435 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-202ENST00000356435 TRIM27P14373 513 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 GEN1Q17RS7 908 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 PARP10Q53GL7 1025 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 DCAF5Q96JK2 942 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 TTC41PQ6P2S7 1318 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 DUOX2Q9NRD8 1548 aa6.21□□□□□ -1.41
PTPRD-202ENST00000356435 DAPK3O43293 454 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 KRT86O43790 486 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 HARSP12081 509 aaKnown RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 CALCOCO2Q13137 446 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 TAOK1Q7L7X3 1001 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 RPUSD2Q8IZ73 545 aaKnown RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 GPR161Q8N6U8 529 aaKnown RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 MAGI2Q86UL8 1455 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ERCC6LQ2NKX8 1250 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 LARGE2Q8N3Y3 721 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 TRMT1Q9NXH9 659 aaKnown RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 IRX3P78415 501 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 UBXN1Q04323 297 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 RILPL1Q5EBL4 403 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 TEX11Q8IYF3 940 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ATP5DP30049 168 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 MCM7P33993 719 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 UBASH3AP57075 661 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ARHGEF6Q15052 776 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 CLUL1Q15846 466 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 SELENOSQ9BQE4 189 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ADGRF5Q8IZF2 1346 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 PALM3A6NDB9 673 aaPredicted RBP6.21□□□□□ -1.42
PTPRD-202ENST00000356435 GRM8O00222 908 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 CHMP2AO43633 222 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 CIB2O75838 187 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ZNF165P49910 485 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 TNNC1P63316 161 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 COPS6Q7L5N1 327 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 ADCY10Q96PN6 1610 aa6.21□□□□□ -1.42
PTPRD-202ENST00000356435 PPP1R2P41236 205 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 YWHAEP62258 255 aaKnown RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 C14orf93Q9H972 538 aaKnown RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 RAD50Q92878 1312 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CTAGE9A4FU28 777 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 H0YIN7 160 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 ARID5AQ03989 594 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CCDC65Q8IXS2 484 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 DHX58Q96C10 678 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 FAM114A2Q9NRY5 505 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 OGFRQ9NZT2 677 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 WWC3Q9ULE0 1092 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-202ENST00000356435 P4HA1P13674 534 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 KIF11P52732 1056 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 SETDB1Q15047 1291 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 CARD10Q9BWT7 1032 aa6.2□□□□□ -1.42
PTPRD-202ENST00000356435 SWAP70Q9UH65 585 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms