RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 PSMB7Q99436 277 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CLSTN2Q9H4D0 955 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CETN3O15182 167 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 WDHD1O75717 1129 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 BAG2O95816 211 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 RXRAP19793 462 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 NOC4LQ9BVI4 516 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 C6orf229H3BNL8 230 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 ARHGAP45Q92619 1136 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 AK2P54819 239 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 ASIC2Q16515 512 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 RILPQ96NA2 401 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 RAB3IPQ96QF0 476 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 TUBBP07437 444 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 ATAD2Q6PL18 1390 aa12.34□□□□□ -0.43
GTF3C1-201ENST00000356183 STMN1P16949 149 aa12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 TRPC3Q13507 836 aa12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 TRIM4Q9C037 500 aa12.33□□□□□ -0.43
GTF3C1-201ENST00000356183 CYP7A1P22680 504 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 ANKRD42Q8N9B4 389 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 I3L4J1 428 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 XAB2Q9HCS7 855 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 LCA5Q86VQ0 697 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 DISP3Q9P2K9 1392 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 PICALMQ13492 652 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 MYCBPQ99417 103 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-201ENST00000356183 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 CCDC141Q6ZP82 1450 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 SPECC1L-ADORA2AF8WAN1 911 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 AP1ARQ63HQ0 302 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 ZSCAN26Q16670 478 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
GTF3C1-201ENST00000356183 NUDT16Q96DE0 195 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 MPHOSPH6Q99547 160 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 AFAP1L2Q8N4X5 818 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 MRPL46Q9H2W6 279 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 MAPK8IP1Q9UQF2 711 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 NPHP3Q7Z494 1330 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 KRT79Q5XKE5 535 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 TRIM6Q9C030 488 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 CSRNP2Q9H175 543 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 VWA3AA6NCI4 1184 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 PFDN1O60925 122 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 MYL5Q02045 173 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 ESR2Q92731 530 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 FAF1Q9UNN5 650 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 MGEA5O60502 916 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 ZNF174Q15697 407 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 UBE3BQ7Z3V4 1068 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 RHPN1Q8TCX5 695 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 RLBP1P12271 317 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 CUL4BQ13620 913 aa12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-201ENST00000356183 ELP1O95163 1332 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 MX2P20592 715 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 PDE1AP54750 535 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 TTC19Q6DKK2 380 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 VTI1AQ96AJ9 217 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 MBIPQ9NS73 344 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 GNGT1P63211 74 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 GABPAQ06546 454 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms