RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 ZEB2O60315 1214 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 GNAI3P08754 354 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 ACTN3Q08043 901 aaPredicted RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 CCDC15Q0P6D6 951 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 CASP8Q14790 479 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 UTP6Q9NYH9 597 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 SYNPO2Q9UMS6 1093 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 TCHHQ07283 1943 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-201ENST00000355648 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 F13A1P00488 732 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 IRAK1P51617 712 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 TMF1P82094 1093 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 BCAS4Q8TDM0 211 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 RGS12O14924 1447 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 GOLGA6L7A0A1B0GV03 622 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 PRPF6O94906 941 aaKnown RBP12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 ZNF24P17028 368 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 NUBP1P53384 320 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 TAX1BP1Q86VP1 789 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 PAGR1Q9BTK6 254 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 TRIM4Q9C037 500 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 SLC39A2Q9NP94 309 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
PHACTR3-201ENST00000355648 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 GOLGA6L9A6NEM1 432 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 SFPQP23246 707 aaKnown RBP eCLIP12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 GJA8P48165 433 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 FCHSD1Q86WN1 690 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 ANKRD13AQ8IZ07 590 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 CDHR2Q9BYE9 1310 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 POLR3AO14802 1390 aaPredicted RBP12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 ZSCAN12O43309 604 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 STX6O43752 255 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 PHACTR2O75167 634 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 RNF8O76064 485 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 APLFQ8IW19 511 aaPredicted RBP12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 GORASP1Q9BQQ3 440 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
PHACTR3-201ENST00000355648 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 SASH1O94885 1247 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 PPFIA1Q13136 1202 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 SKIDA1Q1XH10 827 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 SLC40A1Q9NP59 571 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
PHACTR3-201ENST00000355648 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 E2F6O75461 281 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 ATP5JP18859 108 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 GALNT15Q8N3T1 639 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 FAM76AQ8TAV0 307 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 CENPHQ9H3R5 247 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 TMEM165Q9HC07 324 aa12.27□□□□□ -0.44
PHACTR3-201ENST00000355648 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 TUBB2AQ13885 445 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 OGFOD1Q8N543 542 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 SNRNP27Q8WVK2 155 aaKnown RBP12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 CUL5Q93034 780 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 IL17RAQ96F46 866 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 DNAJC25Q9H1X3 360 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 CLSTN2Q9H4D0 955 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 ACTR5Q9H9F9 607 aaPredicted RBP12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 ABCB6Q9NP58 842 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 RTEL1Q9NZ71 1219 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
PHACTR3-201ENST00000355648 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
PHACTR3-201ENST00000355648 RPSAP08865 295 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms