RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MSL1Q68DK7 614 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 INCENPQ9NQS7 918 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 BRPF3Q9ULD4 1205 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 PARP3Q9Y6F1 533 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 CTDNEP1O95476 244 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 PODXL2Q9NZ53 605 aa30.23■■■□□ 2.43
CLK2-201ENST00000355560 SALL1Q9NSC2 1324 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 PPEF1O14829 653 aaPredicted RBP30.22■■■□□ 2.43
CLK2-201ENST00000355560 WDR66Q8TBY9 1149 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 CNNM2Q9H8M5 875 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 GDPD2Q9HCC8 539 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 ANGEL1Q9UNK9 670 aaKnown RBP30.22■■■□□ 2.43
CLK2-201ENST00000355560 PTPDC1A2A3K4 754 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 SPTY2D1Q68D10 685 aaPredicted RBP30.22■■■□□ 2.43
CLK2-201ENST00000355560 MFSD6Q6ZSS7 791 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 TMC4Q7Z404 712 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 FAM184AQ8NB25 1140 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 STAG1Q8WVM7 1258 aa30.22■■■□□ 2.43
CLK2-201ENST00000355560 GOLGA8BA8MQT2 603 aa30.21■■■□□ 2.43
CLK2-201ENST00000355560 SRGNP10124 158 aa30.21■■■□□ 2.43
CLK2-201ENST00000355560 DZIP1Q86YF9 867 aaKnown RBP30.21■■■□□ 2.43
CLK2-201ENST00000355560 CHMP4CQ96CF2 233 aa30.21■■■□□ 2.43
CLK2-201ENST00000355560 TACC3Q9Y6A5 838 aa30.21■■■□□ 2.43
CLK2-201ENST00000355560 LTBP1Q14766 1721 aa30.21■■■□□ 2.43
CLK2-201ENST00000355560 NCLP19338 710 aaKnown RBP30.2■■■□□ 2.43
CLK2-201ENST00000355560 HMGN5P82970 282 aaKnown RBP30.2■■■□□ 2.43
CLK2-201ENST00000355560 PPARAQ07869 468 aa30.2■■■□□ 2.43
CLK2-201ENST00000355560 AATFQ9NY61 560 aaKnown RBP eCLIP30.2■■■□□ 2.43
CLK2-201ENST00000355560 SH2B2O14492 632 aaPredicted RBP30.2■■■□□ 2.42
CLK2-201ENST00000355560 TMED8Q6PL24 325 aaPredicted RBP30.2■■■□□ 2.42
CLK2-201ENST00000355560 TBC1D16Q8TBP0 767 aa30.2■■■□□ 2.42
CLK2-201ENST00000355560 GPT2Q8TD30 523 aa30.2■■■□□ 2.42
CLK2-201ENST00000355560 KRT23Q9C075 422 aa30.2■■■□□ 2.42
CLK2-201ENST00000355560 POLLQ9UGP5 575 aa30.2■■■□□ 2.42
CLK2-201ENST00000355560 CNPY2Q9Y2B0 182 aa30.2■■■□□ 2.42
CLK2-201ENST00000355560 BAZ2AQ9UIF9 1905 aaKnown RBP30.19■■■□□ 2.42
CLK2-201ENST00000355560 KDM4AO75164 1064 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 EZH2Q15910 746 aaKnown RBP30.19■■■□□ 2.42
CLK2-201ENST00000355560 TMEM87BQ96K49 555 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
CLK2-201ENST00000355560 COL11A2P13942 1736 aaPredicted RBP30.19■■■□□ 2.42
CLK2-201ENST00000355560 KIAA1551Q9HCM1 1747 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 EN1Q05925 392 aaPredicted RBP30.19■■■□□ 2.42
CLK2-201ENST00000355560 FERMT3Q86UX7 667 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 CD209Q9NNX6 404 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 HPS5Q9UPZ3 1129 aa30.19■■■□□ 2.42
CLK2-201ENST00000355560 NPR1P16066 1061 aa30.18■■■□□ 2.42
CLK2-201ENST00000355560 PDE6BP35913 854 aa30.18■■■□□ 2.42
CLK2-201ENST00000355560 SP8Q8IXZ3 490 aa30.18■■■□□ 2.42
CLK2-201ENST00000355560 TOMM22Q9NS69 142 aa30.18■■■□□ 2.42
CLK2-201ENST00000355560 MINDY4BA8MYZ0 360 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 LDHBP07195 334 aaKnown RBP30.17■■■□□ 2.42
CLK2-201ENST00000355560 RNF41Q9H4P4 317 aaPredicted RBP30.17■■■□□ 2.42
CLK2-201ENST00000355560 ZSWIM5Q9P217 1185 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 RRP12Q5JTH9 1297 aaKnown RBP30.17■■■□□ 2.42
CLK2-201ENST00000355560 USP48Q86UV5 1035 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 STK11IPQ8N1F8 1099 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 ATP6V0A2Q9Y487 856 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 KIF3AQ9Y496 699 aa30.17■■■□□ 2.42
CLK2-201ENST00000355560 DNM1Q05193 864 aaKnown RBP30.16■■■□□ 2.42
CLK2-201ENST00000355560 RAB11FIP4Q86YS3 637 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 TMEM87AQ8NBN3 555 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 CAMKK2Q96RR4 588 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 C6orf229H3BNL8 230 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 CAVIN1Q6NZI2 390 aaKnown RBP30.16■■■□□ 2.42
CLK2-201ENST00000355560 IGDCC4Q8TDY8 1250 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 ANAPC4Q9UJX5 808 aa30.16■■■□□ 2.42
CLK2-201ENST00000355560 H3BQV1 296 aa30.15■■■□□ 2.42
CLK2-201ENST00000355560 DHX16O60231 1041 aaKnown RBP30.15■■■□□ 2.42
CLK2-201ENST00000355560 PPFIA3O75145 1194 aa30.15■■■□□ 2.42
CLK2-201ENST00000355560 IL1R1P14778 569 aa30.15■■■□□ 2.42
CLK2-201ENST00000355560 SLC15A2Q16348 729 aa30.15■■■□□ 2.42
CLK2-201ENST00000355560 IFFO2Q5TF58 517 aa30.15■■■□□ 2.42
CLK2-201ENST00000355560 CRNKL1Q9BZJ0 848 aaKnown RBP30.15■■■□□ 2.42
CLK2-201ENST00000355560 IGSF3O75054 1194 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 MBD3O95983 291 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 TMEM67Q5HYA8 995 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 GIMAP6Q6P9H5 292 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 FIBPO43427 364 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 LY9Q9HBG7 655 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 SENP2Q9HC62 589 aa30.14■■■□□ 2.42
CLK2-201ENST00000355560 DUOX1Q9NRD9 1551 aa30.13■■■□□ 2.41
CLK2-201ENST00000355560 IFIT3O14879 490 aaKnown RBP30.13■■■□□ 2.41
CLK2-201ENST00000355560 ALDH1B1P30837 517 aa30.13■■■□□ 2.41
CLK2-201ENST00000355560 APOA5Q6Q788 366 aa30.13■■■□□ 2.41
CLK2-201ENST00000355560 GRIK5Q16478 980 aa30.12■■■□□ 2.41
CLK2-201ENST00000355560 MASTLQ96GX5 879 aa30.12■■■□□ 2.41
CLK2-201ENST00000355560 GOLGA6L3A6NEY3 463 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 SMIM22K7EJ46 135 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 CPLX1O14810 134 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 NFXL1Q6ZNB6 911 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 SGMS1Q86VZ5 419 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 DCP1AQ9NPI6 582 aaPredicted RBP30.11■■■□□ 2.41
CLK2-201ENST00000355560 STK32BQ9NY57 414 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 CYP2D7A0A087X1C5 515 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 GADD45BO75293 160 aaPredicted RBP30.11■■■□□ 2.41
CLK2-201ENST00000355560 LIFRP42702 1097 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 CTR9Q6PD62 1173 aa30.11■■■□□ 2.41
CLK2-201ENST00000355560 FSD2A1L4K1 749 aa30.1■■■□□ 2.41
CLK2-201ENST00000355560 METAP2P50579 478 aaKnown RBP eCLIP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms