RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SPATA5Q8NB90 893 aa19.79■□□□□ 0.76
RAB5C-201ENST00000346213 CSRNP1Q96S65 589 aa19.79■□□□□ 0.76
RAB5C-201ENST00000346213 MAP2K1Q02750 393 aaPredicted RBP19.78■□□□□ 0.76
RAB5C-201ENST00000346213 MECOMQ03112 1051 aa19.78■□□□□ 0.76
RAB5C-201ENST00000346213 OS9Q13438 667 aaPredicted RBP19.78■□□□□ 0.76
RAB5C-201ENST00000346213 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
RAB5C-201ENST00000346213 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
RAB5C-201ENST00000346213 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
RAB5C-201ENST00000346213 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
RAB5C-201ENST00000346213 MAST3O60307 1309 aa19.77■□□□□ 0.76
RAB5C-201ENST00000346213 DDX4Q9NQI0 724 aaKnown RBP19.77■□□□□ 0.76
RAB5C-201ENST00000346213 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.77■□□□□ 0.76
RAB5C-201ENST00000346213 APBB1O00213 710 aa19.76■□□□□ 0.75
RAB5C-201ENST00000346213 CYP2E1P05181 493 aaPredicted RBP19.76■□□□□ 0.75
RAB5C-201ENST00000346213 SH3BP5LQ7L8J4 393 aa19.76■□□□□ 0.75
RAB5C-201ENST00000346213 ADGRA1Q86SQ6 560 aa19.76■□□□□ 0.75
RAB5C-201ENST00000346213 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
RAB5C-201ENST00000346213 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
RAB5C-201ENST00000346213 ATRNL1Q5VV63 1379 aa19.76■□□□□ 0.75
RAB5C-201ENST00000346213 MS4A1P11836 297 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 ZAP70P43403 619 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 CTCFP49711 727 aaPredicted RBP19.75■□□□□ 0.75
RAB5C-201ENST00000346213 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.75■□□□□ 0.75
RAB5C-201ENST00000346213 RHPN1Q8TCX5 695 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 NSUN4Q96CB9 384 aaKnown RBP19.75■□□□□ 0.75
RAB5C-201ENST00000346213 MYO5AQ9Y4I1 1855 aaKnown RBP19.75■□□□□ 0.75
RAB5C-201ENST00000346213 NF2P35240 595 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 RHBDL3P58872 404 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 TCP10Q12799 353 aa19.75■□□□□ 0.75
RAB5C-201ENST00000346213 MYH2Q9UKX2 1941 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 MROH7-TTC4A0A0A0MT08 1334 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 WDHD1O75717 1129 aaPredicted RBP19.74■□□□□ 0.75
RAB5C-201ENST00000346213 GORABQ5T7V8 394 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 ARMC9Q7Z3E5 817 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 RPAP2Q8IXW5 612 aaPredicted RBP19.74■□□□□ 0.75
RAB5C-201ENST00000346213 AIDAQ96BJ3 306 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 ANTXR1Q9H6X2 564 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 USP40Q9NVE5 1235 aa19.74■□□□□ 0.75
RAB5C-201ENST00000346213 BTDP43251 543 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 TNFAIP1Q13829 316 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 TTC39AQ5SRH9 613 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 SPRYD7Q5W111 196 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 AACSQ86V21 672 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.73■□□□□ 0.753e-6■■■■■ 38.3
RAB5C-201ENST00000346213 RNF186Q9NXI6 227 aa19.73■□□□□ 0.75
RAB5C-201ENST00000346213 RPAP1Q9BWH6 1393 aaPredicted RBP19.73■□□□□ 0.75
RAB5C-201ENST00000346213 FKBP1CQ5VVH2 108 aa19.72■□□□□ 0.75
RAB5C-201ENST00000346213 DZIP1Q86YF9 867 aaKnown RBP19.72■□□□□ 0.75
RAB5C-201ENST00000346213 FAM163AQ96GL9 167 aaPredicted RBP19.72■□□□□ 0.75
RAB5C-201ENST00000346213 R3HDMLQ9H3Y0 253 aa19.72■□□□□ 0.75
RAB5C-201ENST00000346213 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
RAB5C-201ENST00000346213 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
RAB5C-201ENST00000346213 SUPT20HL1Q3ZLR7 823 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 ZNF512BQ96KM6 892 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-201ENST00000346213 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 SMARCA5O60264 1052 aaPredicted RBP19.71■□□□□ 0.75
RAB5C-201ENST00000346213 UQCRFS1P1P0C7P4 283 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 RGS3P49796 1198 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 VGLL4Q14135 290 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 MIGA2Q7L4E1 593 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 ELP3Q9H9T3 547 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 LAMB1P07942 1786 aa19.71■□□□□ 0.75
RAB5C-201ENST00000346213 GPR75-ASB3A0A0A6YYF3 556 aa19.7■□□□□ 0.74
RAB5C-201ENST00000346213 TRPA1O75762 1119 aa19.7■□□□□ 0.74
RAB5C-201ENST00000346213 FAM151AQ8WW52 585 aa19.7■□□□□ 0.74
RAB5C-201ENST00000346213 SNCAIPQ9Y6H5 919 aa19.7■□□□□ 0.74
RAB5C-201ENST00000346213 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
RAB5C-201ENST00000346213 PPP1R12BO60237 982 aaPredicted RBP19.69■□□□□ 0.74
RAB5C-201ENST00000346213 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
RAB5C-201ENST00000346213 ZKSCAN4Q969J2 545 aaPredicted RBP19.69■□□□□ 0.74
RAB5C-201ENST00000346213 EDC3Q96F86 508 aaKnown RBP19.69■□□□□ 0.74
RAB5C-201ENST00000346213 IDI2Q9BXS1 227 aa19.69■□□□□ 0.74
RAB5C-201ENST00000346213 BCL11AQ9H165 835 aa19.69■□□□□ 0.74
RAB5C-201ENST00000346213 RAI14Q9P0K7 980 aa19.69■□□□□ 0.74
RAB5C-201ENST00000346213 INPP5BP32019 993 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 TNNI2P48788 182 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 HTTP42858 3142 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 IGF2BP3O00425 579 aaKnown RBP eCLIP19.68■□□□□ 0.741e-6■■■□□ 17.8
RAB5C-201ENST00000346213 CHGBP05060 677 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 PTPN18Q99952 460 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 TMOD2Q9NZR1 351 aa19.68■□□□□ 0.74
RAB5C-201ENST00000346213 DOCK2Q92608 1830 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 IREB2P48200 963 aaKnown RBP19.67■□□□□ 0.74
RAB5C-201ENST00000346213 TM4SF4P48230 202 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 PICALMQ13492 652 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 ERC1Q8IUD2 1116 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 ANKRD13AQ8IZ07 590 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 SH3RF3Q8TEJ3 882 aaPredicted RBP19.67■□□□□ 0.74
RAB5C-201ENST00000346213 KIF1BPQ96EK5 621 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 SLC10A4Q96EP9 437 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
RAB5C-201ENST00000346213 SIPA1L1O43166 1804 aa19.67■□□□□ 0.74
RAB5C-201ENST00000346213 SLFNL1Q499Z3 407 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 IFFO2Q5TF58 517 aa19.66■□□□□ 0.74
RAB5C-201ENST00000346213 SPTY2D1Q68D10 685 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms