RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.39
SRPK1-201ENST00000346162 AFMP43652 599 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ELP1O95163 1332 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ITGA6P23229 1130 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
SRPK1-201ENST00000346162 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
SRPK1-201ENST00000346162 TSG101Q99816 390 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ARHGAP25P42331 645 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
SRPK1-201ENST00000346162 CNPY4Q8N129 248 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
SRPK1-201ENST00000346162 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
SRPK1-201ENST00000346162 FBXO38Q6PIJ6 1188 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
SRPK1-201ENST00000346162 GOLGA6CA6NDK9 693 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 N4BP3O15049 544 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 FGFR1OPO95684 399 aaKnown RBP17.5■□□□□ 0.39
SRPK1-201ENST00000346162 GOLGA6DP0CG33 693 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 MTIF2P46199 727 aaKnown RBP17.5■□□□□ 0.39
SRPK1-201ENST00000346162 APPBP2Q92624 585 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 CALML4Q96GE6 196 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 GOLGA6AQ9NYA3 693 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 TET3O43151 1660 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 NCAPGQ9BPX3 1015 aa17.5■□□□□ 0.39
SRPK1-201ENST00000346162 ARID4AP29374 1257 aaPredicted RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 AMPD3Q01432 767 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 SEPT7Q16181 437 aaKnown RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 ATP5JP18859 108 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 NCOA5Q9HCD5 579 aaKnown RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 MRVI1Q9Y6F6 885 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 MCTP2Q6DN12 878 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 SPATS2LQ9NUQ6 558 aaKnown RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
SRPK1-201ENST00000346162 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 MBD4O95243 580 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 GSTO1P78417 241 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 CEP85LQ5SZL2 805 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 PLEKHG1Q9ULL1 1385 aa17.49■□□□□ 0.39
SRPK1-201ENST00000346162 TMEM132AQ24JP5 1023 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 EFCAB13Q8IY85 973 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 TSPY3P0CV98 308 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 TSPY8P0CW00 308 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 SF3B2Q13435 895 aaKnown RBP17.48■□□□□ 0.39
SRPK1-201ENST00000346162 CPLX4Q7Z7G2 160 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 A0A1B0GVL5 298 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 GNAQP50148 359 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 USP6P35125 1406 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
SRPK1-201ENST00000346162 RBBP5Q15291 538 aaKnown RBP17.48■□□□□ 0.39
SRPK1-201ENST00000346162 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 OSBPL3Q9H4L5 887 aa17.48■□□□□ 0.39
SRPK1-201ENST00000346162 CHD1O14646 1710 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 GPAA1O43292 621 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 SETSIPP0DME0 302 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 ARFGAP2Q8N6H7 521 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 FAM160A1Q05DH4 1040 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 CEP83Q9Y592 693 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 ABCC3O15438 1527 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 B4E1Z4 1266 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 BUB1BO60566 1050 aaPredicted RBP17.47■□□□□ 0.39
SRPK1-201ENST00000346162 MAGEA9P43362 315 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 PHKG2P15735 406 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 PTH1RQ03431 593 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
SRPK1-201ENST00000346162 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 KDRP35968 1356 aa17.47■□□□□ 0.39
SRPK1-201ENST00000346162 A0A087WUV0 522 aaPredicted RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 ANKS4BQ8N8V4 417 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 MORC2Q9Y6X9 1032 aaPredicted RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 SEC31AO94979 1220 aaKnown RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 ETF1P62495 437 aaKnown RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 RRAGBQ5VZM2 374 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 DHX58Q96C10 678 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.46■□□□□ 0.39
SRPK1-201ENST00000346162 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 CALM1P0DP23 149 aa17.46■□□□□ 0.39
SRPK1-201ENST00000346162 CALM2P0DP24 149 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms