RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
HMGN3-202ENST00000344726 SLC10A4Q96EP9 437 aa17.84■□□□□ 0.45
HMGN3-202ENST00000344726 AK9Q5TCS8 1911 aa17.84■□□□□ 0.45
HMGN3-202ENST00000344726 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
HMGN3-202ENST00000344726 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
HMGN3-202ENST00000344726 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
HMGN3-202ENST00000344726 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
HMGN3-202ENST00000344726 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.44
HMGN3-202ENST00000344726 NEUROD6Q96NK8 337 aa17.83■□□□□ 0.44
HMGN3-202ENST00000344726 ELP3Q9H9T3 547 aa17.83■□□□□ 0.44
HMGN3-202ENST00000344726 UNCXA6NJT0 531 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
HMGN3-202ENST00000344726 TNNI2P48788 182 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 SREBF2Q12772 1141 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 NFIAQ12857 509 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 VGLL4Q14135 290 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 MVPQ14764 893 aaKnown RBP17.82■□□□□ 0.44
HMGN3-202ENST00000344726 CDC42EP5Q6NZY7 148 aa17.82■□□□□ 0.44
HMGN3-202ENST00000344726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
HMGN3-202ENST00000344726 RPAP1Q9BWH6 1393 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 PDS5AQ29RF7 1337 aaKnown RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
HMGN3-202ENST00000344726 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
HMGN3-202ENST00000344726 ZNF296Q8WUU4 475 aaPredicted RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
HMGN3-202ENST00000344726 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
HMGN3-202ENST00000344726 DSG3P32926 999 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 FKBP1CQ5VVH2 108 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 IFNL1Q8IU54 200 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 ZNF384Q8TF68 577 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 PTPN18Q99952 460 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 CFHR5Q9BXR6 569 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 COG6Q9Y2V7 657 aa17.8■□□□□ 0.44
HMGN3-202ENST00000344726 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 CCDC85CA6NKD9 419 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 GPR25O00155 361 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 MS4A1P11836 297 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 ARID4AP29374 1257 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-202ENST00000344726 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-202ENST00000344726 TNNI3KQ59H18 835 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 OPTNQ96CV9 577 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 FAM198AQ9UFP1 575 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 FPGT-TNNI3KV9GXZ4 949 aa17.79■□□□□ 0.44
HMGN3-202ENST00000344726 GAKO14976 1311 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 MAP3K9P80192 1104 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
HMGN3-202ENST00000344726 ZFPM1Q8IX07 1006 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 DBNDD2Q9BQY9 259 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 ABCF2Q9UG63 623 aa17.78■□□□□ 0.44
HMGN3-202ENST00000344726 TESPA1A2RU30 521 aaPredicted RBP17.77■□□□□ 0.44
HMGN3-202ENST00000344726 MCAMP43121 646 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 TCP10Q12799 353 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 GORABQ5T7V8 394 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
HMGN3-202ENST00000344726 SPATA5Q8NB90 893 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 ZKSCAN4Q969J2 545 aaPredicted RBP17.77■□□□□ 0.44
HMGN3-202ENST00000344726 ZBTB40Q9NUA8 1239 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.44
HMGN3-202ENST00000344726 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
HMGN3-202ENST00000344726 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 SIRT2Q8IXJ6 389 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 WRNIP1Q96S55 665 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 TLR7Q9NYK1 1049 aaKnown RBP17.76■□□□□ 0.43
HMGN3-202ENST00000344726 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 DOCK2Q92608 1830 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
HMGN3-202ENST00000344726 INHBEP58166 350 aa17.75■□□□□ 0.43
HMGN3-202ENST00000344726 MECOMQ03112 1051 aa17.75■□□□□ 0.43
HMGN3-202ENST00000344726 SH3BP5LQ7L8J4 393 aa17.75■□□□□ 0.43
HMGN3-202ENST00000344726 DZIP1Q86YF9 867 aaKnown RBP17.75■□□□□ 0.43
HMGN3-202ENST00000344726 BRI3BPQ8WY22 251 aa17.75■□□□□ 0.43
HMGN3-202ENST00000344726 OTUD5Q96G74 571 aa17.75■□□□□ 0.43
HMGN3-202ENST00000344726 DBNLQ9UJU6 430 aaKnown RBP17.75■□□□□ 0.43
HMGN3-202ENST00000344726 MAST2Q6P0Q8 1798 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 CDK5RAP2Q96SN8 1893 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 SPDYE5A6NIY4 337 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 ABCB7O75027 752 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 INPP5BP32019 993 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 CAP1Q01518 475 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 SPTY2D1Q68D10 685 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-202ENST00000344726 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-202ENST00000344726 FAM163AQ96GL9 167 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-202ENST00000344726 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
HMGN3-202ENST00000344726 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
HMGN3-202ENST00000344726 SNRKQ9NRH2 765 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 CSADQ9Y600 493 aa17.74■□□□□ 0.43
HMGN3-202ENST00000344726 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms