RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 SEMA3EO15041 775 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 GJA5P36382 358 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
SGCA-202ENST00000344627 VGLL4Q14135 290 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 PTPN18Q99952 460 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 TMEM39BQ9GZU3 492 aa15.41■□□□□ 0.06
SGCA-202ENST00000344627 CCL15-CCL14A0A0B4J2E2 113 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 TRIM27P14373 513 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 PPATQ06203 517 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 SNAPC2Q13487 334 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 KIF22Q14807 665 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 TAF1CQ15572 869 aaPredicted RBP15.4■□□□□ 0.06
SGCA-202ENST00000344627 CCL15Q16663 113 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 ZGPATQ8N5A5 531 aaKnown RBP15.4■□□□□ 0.06
SGCA-202ENST00000344627 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
SGCA-202ENST00000344627 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 GNAI2P04899 355 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 CACNB3P54284 484 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 PPIL2Q13356 520 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
SGCA-202ENST00000344627 CD99L2Q8TCZ2 262 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 FAM151AQ8WW52 585 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 BRI3BPQ8WY22 251 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 TMEM106CQ9BVX2 250 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 SALL1Q9NSC2 1324 aa15.39■□□□□ 0.05
SGCA-202ENST00000344627 TNRC18O15417 2968 aaPredicted RBP15.38■□□□□ 0.05
SGCA-202ENST00000344627 TLR2O60603 784 aa15.38■□□□□ 0.05
SGCA-202ENST00000344627 SLF2Q8IX21 1173 aa15.38■□□□□ 0.05
SGCA-202ENST00000344627 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
SGCA-202ENST00000344627 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
SGCA-202ENST00000344627 DENND2AQ9ULE3 1009 aa15.38■□□□□ 0.05
SGCA-202ENST00000344627 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
SGCA-202ENST00000344627 PHKA1P46020 1223 aa15.37■□□□□ 0.05
SGCA-202ENST00000344627 TIMM10P62072 90 aa15.37■□□□□ 0.05
SGCA-202ENST00000344627 ZKSCAN2Q63HK3 967 aa15.37■□□□□ 0.05
SGCA-202ENST00000344627 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
SGCA-202ENST00000344627 OTUD5Q96G74 571 aa15.37■□□□□ 0.05
SGCA-202ENST00000344627 CAPN2P17655 700 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 ADORA1P30542 326 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
SGCA-202ENST00000344627 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 ZNF112Q9UJU3 913 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 SNCAIPQ9Y6H5 919 aa15.36■□□□□ 0.05
SGCA-202ENST00000344627 PDS5AQ29RF7 1337 aaKnown RBP15.36■□□□□ 0.05
SGCA-202ENST00000344627 HOXD10P28358 340 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 TFCP2Q12800 502 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.05
SGCA-202ENST00000344627 SLC9C1Q4G0N8 1177 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
SGCA-202ENST00000344627 PDE4DIPQ5VU43 2346 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 IRF6O14896 467 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
SGCA-202ENST00000344627 PRDX5P30044 214 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 DIXDC1Q155Q3 683 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
SGCA-202ENST00000344627 ANKRD23Q86SG2 305 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 FAM43AQ8N2R8 423 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
SGCA-202ENST00000344627 A0A1B0GUL7 405 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 CXCL11O14625 94 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 ENTPD3O75355 529 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
SGCA-202ENST00000344627 TCP10Q12799 353 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 SPTY2D1Q68D10 685 aaPredicted RBP15.33■□□□□ 0.04
SGCA-202ENST00000344627 XAGE2Q96GT9 111 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 DAGLAQ9Y4D2 1042 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.04
SGCA-202ENST00000344627 PNMA6EA0A0J9YXQ4 647 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 BTBD19C9JJ37 291 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 OS9Q13438 667 aaPredicted RBP15.32■□□□□ 0.04
SGCA-202ENST00000344627 MTX1Q13505 466 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 MVPQ14764 893 aaKnown RBP15.32■□□□□ 0.04
SGCA-202ENST00000344627 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
SGCA-202ENST00000344627 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 ZKSCAN4Q969J2 545 aaPredicted RBP15.32■□□□□ 0.04
SGCA-202ENST00000344627 FAM163AQ96GL9 167 aaPredicted RBP15.32■□□□□ 0.04
SGCA-202ENST00000344627 IDI2Q9BXS1 227 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 OTOFQ9HC10 1997 aa15.32■□□□□ 0.04
SGCA-202ENST00000344627 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 IGSF3O75054 1194 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 CDC42EP5Q6NZY7 148 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 C17orf99Q6UX52 265 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 MIGA2Q7L4E1 593 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
SGCA-202ENST00000344627 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
SGCA-202ENST00000344627 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
SGCA-202ENST00000344627 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
SGCA-202ENST00000344627 PARK7Q99497 189 aaKnown RBP15.3■□□□□ 0.04
SGCA-202ENST00000344627 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms