RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MKRN3Q13064 507 aaKnown RBP19.74■□□□□ 0.75
ATG4B-201ENST00000344376 PDE3AQ14432 1141 aa19.74■□□□□ 0.75
ATG4B-201ENST00000344376 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
ATG4B-201ENST00000344376 RPAP2Q8IXW5 612 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-201ENST00000344376 ANKRD13AQ8IZ07 590 aa19.74■□□□□ 0.75
ATG4B-201ENST00000344376 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-201ENST00000344376 USP2O75604 605 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-201ENST00000344376 SREBF2Q12772 1141 aa19.74■□□□□ 0.75
ATG4B-201ENST00000344376 RPAP1Q9BWH6 1393 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-201ENST00000344376 SPRYD7Q5W111 196 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 CDC42EP5Q6NZY7 148 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 CDAN1Q8IWY9 1227 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 DBNDD2Q9BQY9 259 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 ZBTB40Q9NUA8 1239 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 USP40Q9NVE5 1235 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 RNF186Q9NXI6 227 aa19.73■□□□□ 0.75
ATG4B-201ENST00000344376 GAKO14976 1311 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 TRPA1O75762 1119 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 ZBTB48P10074 688 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-201ENST00000344376 MCAMP43121 646 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 GSTO1P78417 241 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 FAM151AQ8WW52 585 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
ATG4B-201ENST00000344376 DCAF15Q66K64 600 aa19.71■□□□□ 0.75
ATG4B-201ENST00000344376 PI16Q6UXB8 463 aa19.71■□□□□ 0.75
ATG4B-201ENST00000344376 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
ATG4B-201ENST00000344376 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
ATG4B-201ENST00000344376 MANSC4A6NHS7 340 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-201ENST00000344376 LDHCP07864 332 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 MECOMQ03112 1051 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 FAM163AQ96GL9 167 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-201ENST00000344376 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 CSADQ9Y600 493 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 MROH7-TTC4A0A0A0MT08 1334 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 TM4SF4P48230 202 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 MAP3K9P80192 1104 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 TCP10Q12799 353 aa19.7■□□□□ 0.74
ATG4B-201ENST00000344376 ZNF512BQ96KM6 892 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-201ENST00000344376 BTDP43251 543 aa19.69■□□□□ 0.74
ATG4B-201ENST00000344376 INHBEP58166 350 aa19.69■□□□□ 0.74
ATG4B-201ENST00000344376 C20orf194Q5TEA3 1177 aa19.69■□□□□ 0.74
ATG4B-201ENST00000344376 TBC1D9Q6ZT07 1266 aa19.69■□□□□ 0.74
ATG4B-201ENST00000344376 CCDC8Q9H0W5 538 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-201ENST00000344376 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
ATG4B-201ENST00000344376 DBNLQ9UJU6 430 aaKnown RBP19.69■□□□□ 0.74
ATG4B-201ENST00000344376 NFIAQ12857 509 aa19.68■□□□□ 0.74
ATG4B-201ENST00000344376 AACSQ86V21 672 aa19.68■□□□□ 0.74
ATG4B-201ENST00000344376 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATG4B-201ENST00000344376 EAF2Q96CJ1 260 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-201ENST00000344376 SNRKQ9NRH2 765 aa19.68■□□□□ 0.74
ATG4B-201ENST00000344376 RHPN1Q8TCX5 695 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 NSUN4Q96CB9 384 aaKnown RBP19.67■□□□□ 0.74
ATG4B-201ENST00000344376 KIF1BPQ96EK5 621 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
ATG4B-201ENST00000344376 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
ATG4B-201ENST00000344376 IDI2Q9BXS1 227 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 ZNF341Q9BYN7 854 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 TLR7Q9NYK1 1049 aaKnown RBP19.67■□□□□ 0.74
ATG4B-201ENST00000344376 AKAP11Q9UKA4 1901 aa19.67■□□□□ 0.74
ATG4B-201ENST00000344376 GPR75-ASB3A0A0A6YYF3 556 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 ENTPD3O75355 529 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 VGLL4Q14135 290 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-201ENST00000344376 OPTNQ96CV9 577 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 FAM198AQ9UFP1 575 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 MYH2Q9UKX2 1941 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 IGSF3O75054 1194 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 RAB11FIP3O75154 756 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 MAP4K4O95819 1239 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-201ENST00000344376 RGS3P49796 1198 aa19.66■□□□□ 0.74
ATG4B-201ENST00000344376 CLASRPQ8N2M8 674 aaKnown RBP19.66■□□□□ 0.74
ATG4B-201ENST00000344376 APBB1O00213 710 aa19.65■□□□□ 0.74
ATG4B-201ENST00000344376 SIRT2Q8IXJ6 389 aa19.65■□□□□ 0.74
ATG4B-201ENST00000344376 IL1RAPL2Q9NP60 686 aa19.65■□□□□ 0.74
ATG4B-201ENST00000344376 OTOFQ9HC10 1997 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 ZAP70P43403 619 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 OTUD7BQ6GQQ9 843 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 NAA16Q6N069 864 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-201ENST00000344376 MIGA2Q7L4E1 593 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 ZSCAN29Q8IWY8 852 aaPredicted RBP19.64■□□□□ 0.73
ATG4B-201ENST00000344376 ZNF384Q8TF68 577 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 RFX7Q2KHR2 1363 aa19.64■□□□□ 0.73
ATG4B-201ENST00000344376 WDHD1O75717 1129 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-201ENST00000344376 CAPN15O75808 1086 aa19.63■□□□□ 0.73
ATG4B-201ENST00000344376 CYP2E1P05181 493 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-201ENST00000344376 GJA5P36382 358 aa19.63■□□□□ 0.73
ATG4B-201ENST00000344376 PICALMQ13492 652 aa19.63■□□□□ 0.73
ATG4B-201ENST00000344376 BAG3O95817 575 aa19.62■□□□□ 0.73
ATG4B-201ENST00000344376 IFIT2P09913 472 aaKnown RBP19.62■□□□□ 0.73
ATG4B-201ENST00000344376 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
ATG4B-201ENST00000344376 OTUD5Q96G74 571 aa19.62■□□□□ 0.73
ATG4B-201ENST00000344376 SPDYE5A6NIY4 337 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 TBC1D8O95759 1140 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 PLCG2P16885 1265 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 GTF2A2P52657 109 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 RHBDL3P58872 404 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 ERO1BQ86YB8 467 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms