RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 DLGAP5Q15398 846 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 CPXCR1Q8N123 301 aa16.9■□□□□ 0.3
UBE3B-202ENST00000342494 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.3
UBE3B-202ENST00000342494 TCP10Q12799 353 aa16.89■□□□□ 0.3
UBE3B-202ENST00000342494 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.3
UBE3B-202ENST00000342494 TMEM87BQ96K49 555 aa16.89■□□□□ 0.3
UBE3B-202ENST00000342494 PAIP2Q9BPZ3 127 aaKnown RBP16.89■□□□□ 0.3
UBE3B-202ENST00000342494 SYT1P21579 422 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 CHMLP26374 656 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 GPR162Q16538 588 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 PRDM1O75626 825 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 PLCD1P51178 756 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 TRIM6Q9C030 488 aaPredicted RBP16.89■□□□□ 0.29
UBE3B-202ENST00000342494 FAM107BQ9H098 131 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
UBE3B-202ENST00000342494 CCDC63Q8NA47 563 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 LPIN2Q92539 896 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 H7C1D1 291 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 HOXB7P09629 217 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 EPB41P11171 864 aaKnown RBP16.89■□□□□ 0.29
UBE3B-202ENST00000342494 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
UBE3B-202ENST00000342494 STX10O60499 249 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 KRT5P13647 590 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
UBE3B-202ENST00000342494 STRN3Q13033 797 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 TRAF5O00463 557 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 DEXIO95424 95 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 G2E3Q7L622 706 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 APPBP2Q92624 585 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
UBE3B-202ENST00000342494 DNAI1Q9UI46 699 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
UBE3B-202ENST00000342494 CCDC129Q6ZRS4 1044 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 PAXBP1Q9Y5B6 917 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 KLHDC4Q8TBB5 520 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
UBE3B-202ENST00000342494 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 MAK16Q9BXY0 300 aaKnown RBP16.87■□□□□ 0.29
UBE3B-202ENST00000342494 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 TRPC3Q13507 836 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 CCNT1O60563 726 aaKnown RBP16.87■□□□□ 0.29
UBE3B-202ENST00000342494 TERF1P54274 439 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 PIK3AP1Q6ZUJ8 805 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 CCDC186Q7Z3E2 898 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 RNF34Q969K3 372 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 FAM169AQ9Y6X4 670 aa16.87■□□□□ 0.29
UBE3B-202ENST00000342494 GPAA1O43292 621 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 PLEKHM2Q8IWE5 1019 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-202ENST00000342494 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 RFX1P22670 979 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 CBX1P83916 185 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 CCDC14Q49A88 953 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 KIFAP3Q92845 792 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
UBE3B-202ENST00000342494 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
UBE3B-202ENST00000342494 MAPKAPK5Q8IW41 473 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 MROH5Q6ZUA9 1318 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 CTAGE9A4FU28 777 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
UBE3B-202ENST00000342494 PPP1R2P41236 205 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 FBF1Q8TES7 1133 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 TXKP42681 527 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 SNX16P57768 344 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
UBE3B-202ENST00000342494 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 M0QZ92 97 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 NCAPH2Q6IBW4 605 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 CSADQ9Y600 493 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
UBE3B-202ENST00000342494 MXRA7P84157 204 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 TYRO3Q06418 890 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 ATP2A2P16615 1042 aaKnown RBP16.84■□□□□ 0.29
UBE3B-202ENST00000342494 PDE4DQ08499 809 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 USH1GQ495M9 461 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
UBE3B-202ENST00000342494 RLBP1P12271 317 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 ADCY7P51828 1080 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
UBE3B-202ENST00000342494 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
UBE3B-202ENST00000342494 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
UBE3B-202ENST00000342494 GAS8O95995 478 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms