RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CTAGE15A4D2H0 777 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 CTAGE8P0CG41 777 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 SPA17Q15506 151 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 CTAGE6Q86UF2 777 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 CTAGE4Q8IX94 777 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 CHD1O14646 1710 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 AP5Z1O43299 807 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 CAVIN4Q5BKX8 364 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 SERTAD1Q9UHV2 236 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 RCOR1Q9UKL0 485 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 GRAMD1CQ8IYS0 662 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 GOLPH3LQ9H4A5 285 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 COPRSQ9NQ92 184 aa14.16□□□□□ -0.14
SNRNP48-201ENST00000342415 WDHD1O75717 1129 aaPredicted RBP14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 FBXO38Q6PIJ6 1188 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 KRBA2Q6ZNG9 492 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 GBP3Q9H0R5 595 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 EPC1Q9H2F5 836 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 MYO1BO43795 1136 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 IQGAP1P46940 1657 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 ODF2Q5BJF6 829 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 DSCC1Q9BVC3 393 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 AKR1B15C9JRZ8 316 aaPredicted RBP14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
SNRNP48-201ENST00000342415 MAST3O60307 1309 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 UBXN1Q04323 297 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 ESR2Q92731 530 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 PPP1R13BQ96KQ4 1090 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 KRT23Q9C075 422 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 BLZF1Q9H2G9 400 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 DNAJC10Q8IXB1 793 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 PSMB7Q99436 277 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 VPS54Q9P1Q0 977 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 INCENPQ9NQS7 918 aa14.14□□□□□ -0.15
SNRNP48-201ENST00000342415 M0R2C6 588 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 IMPACTQ9P2X3 320 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 AKR1B10O60218 316 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 OAS2P29728 719 aaKnown RBP14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 STAT6P42226 847 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 GABPB1Q06547 395 aaPredicted RBP14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 DZIP1Q86YF9 867 aaKnown RBP14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 CARMIL3Q8ND23 1372 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 UQCRFS1P1P0C7P4 283 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 POSTNQ15063 836 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 SIRT1Q96EB6 747 aa14.13□□□□□ -0.15
SNRNP48-201ENST00000342415 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 FAM170AA1A519 330 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 SNAP23O00161 211 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 ARHGAP6O43182 974 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 ARID5AQ03989 594 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 SMYD4Q8IYR2 804 aaPredicted RBP14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 PUS7LQ9H0K6 701 aaKnown RBP14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 PLEKHA4Q9H4M7 779 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 SEPT11Q9NVA2 429 aaKnown RBP14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 PHKG2P15735 406 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CHMP4BP1P59074 171 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CRB1P82279 1406 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CCDC96Q2M329 555 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 ZNF710Q8N1W2 664 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 ST7Q9NRC1 585 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 SPTLC3Q9NUV7 552 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 TAB2Q9NYJ8 693 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CEP152O94986 1710 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 KIAA0754O94854 1291 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 BCCIPQ9P287 314 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 MACROD2A1Z1Q3 448 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
SNRNP48-201ENST00000342415 CFAP74Q9C0B2 1584 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 GYS2P54840 703 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 ZNF444Q8N0Y2 327 aaPredicted RBP14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 TXLNBQ8N3L3 684 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 DZIP3Q86Y13 1208 aaKnown RBP14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms