RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMEM232C9JQI7 657 aa21.1■□□□□ 0.97
SMPD1-201ENST00000342245 KIAA0754O94854 1291 aa21.1■□□□□ 0.97
SMPD1-201ENST00000342245 GCFC2P16383 781 aaKnown RBP21.1■□□□□ 0.97
SMPD1-201ENST00000342245 SCP2P22307 547 aa21.1■□□□□ 0.97
SMPD1-201ENST00000342245 ARHGAP25P42331 645 aa21.1■□□□□ 0.97
SMPD1-201ENST00000342245 PREPLQ4J6C6 727 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-201ENST00000342245 BABAM1Q9NWV8 329 aa21.1■□□□□ 0.97
SMPD1-201ENST00000342245 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-201ENST00000342245 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 STIM1Q13586 685 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-201ENST00000342245 XAGE2Q96GT9 111 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 NAPGQ99747 312 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-201ENST00000342245 MRPL44Q9H9J2 332 aaKnown RBP21.09■□□□□ 0.97
SMPD1-201ENST00000342245 METP08581 1390 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 GOLGA8FQ08AF8 430 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 GOLGA8DPQ0D2H9 430 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 ILDR1Q86SU0 546 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-201ENST00000342245 COG1Q8WTW3 980 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 FAXDC2Q96IV6 333 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 SIL1Q9H173 461 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 ADGRG1Q9Y653 693 aa21.09■□□□□ 0.97
SMPD1-201ENST00000342245 A0A0D9SFI3 127 aa21.08■□□□□ 0.97
SMPD1-201ENST00000342245 H0YHG0 523 aa21.08■□□□□ 0.97
SMPD1-201ENST00000342245 WASLO00401 505 aaPredicted RBP21.08■□□□□ 0.97
SMPD1-201ENST00000342245 CRYMQ14894 314 aa21.08■□□□□ 0.97
SMPD1-201ENST00000342245 CPLX2Q6PUV4 134 aaKnown RBP21.08■□□□□ 0.97
SMPD1-201ENST00000342245 MICALCLQ6ZW33 695 aa21.08■□□□□ 0.97
SMPD1-201ENST00000342245 TEX11Q8IYF3 940 aa21.08■□□□□ 0.97
SMPD1-201ENST00000342245 TTF2Q9UNY4 1162 aaKnown RBP21.08■□□□□ 0.97
SMPD1-201ENST00000342245 SALL1Q9NSC2 1324 aa21.08■□□□□ 0.96
SMPD1-201ENST00000342245 TARSL2A2RTX5 802 aaKnown RBP21.07■□□□□ 0.96
SMPD1-201ENST00000342245 EIF3HO15372 352 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMPD1-201ENST00000342245 BRAPQ7Z569 592 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 RNF217Q8TC41 542 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 BCAS4Q8TDM0 211 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 CRACR2AQ9BSW2 395 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 FSD1Q9BTV5 496 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 CAPS2Q9BXY5 557 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 CAPN7Q9Y6W3 813 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 AGLP35573 1532 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 TAF5LO75529 589 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 ZNF569Q5MCW4 686 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 ISM2Q6H9L7 571 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 KAT14Q9H8E8 782 aa21.07■□□□□ 0.96
SMPD1-201ENST00000342245 GOLGA6CA6NDK9 693 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 AKR1B15C9JRZ8 316 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-201ENST00000342245 GOLGA6DP0CG33 693 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 YTHDF3Q7Z739 585 aaKnown RBP21.06■□□□□ 0.96
SMPD1-201ENST00000342245 INTS13Q9NVM9 706 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 FANCLQ9NW38 375 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 GOLGA6AQ9NYA3 693 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 LRRC37A3O60309 1634 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 FNTAP49354 379 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 MRPL12P52815 198 aaKnown RBP21.06■□□□□ 0.96
SMPD1-201ENST00000342245 PLCB4Q15147 1175 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 DESI2Q9BSY9 194 aa21.06■□□□□ 0.96
SMPD1-201ENST00000342245 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMPD1-201ENST00000342245 PFKFB1P16118 471 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 RASGRP2Q7LDG7 609 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 OTUD6BQ8N6M0 293 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
SMPD1-201ENST00000342245 RPGRIP1Q96KN7 1286 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 LZTFL1Q9NQ48 299 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 CTDNEP1O95476 244 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 ADKP55263 362 aaKnown RBP21.05■□□□□ 0.96
SMPD1-201ENST00000342245 WLSQ5T9L3 541 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 DACH1Q9UI36 760 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 TAF6LQ9Y6J9 622 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 C3P01024 1663 aa21.05■□□□□ 0.96
SMPD1-201ENST00000342245 AACSQ86V21 672 aa21.04■□□□□ 0.96
SMPD1-201ENST00000342245 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
SMPD1-201ENST00000342245 KLHL33A6NCF5 533 aa21.04■□□□□ 0.96
SMPD1-201ENST00000342245 USP14P54578 494 aa21.04■□□□□ 0.96
SMPD1-201ENST00000342245 ELOA2Q8IYF1 753 aaPredicted RBP21.04■□□□□ 0.96
SMPD1-201ENST00000342245 NUDT16Q96DE0 195 aaKnown RBP21.04■□□□□ 0.96
SMPD1-201ENST00000342245 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
SMPD1-201ENST00000342245 GOLGA8KD6RF30 607 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 SYKP43405 635 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 CCDC50Q8IVM0 306 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 N4BP2L2Q92802 583 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 PAGR1Q9BTK6 254 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 HOOK1Q9UJC3 728 aaKnown RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 ZC3H4Q9UPT8 1303 aaKnown RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 KDM6AO15550 1401 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 IRX2Q9BZI1 471 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-201ENST00000342245 ODF2LQ9ULJ1 636 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 CARMIL3Q8ND23 1372 aa21.03■□□□□ 0.96
SMPD1-201ENST00000342245 MEFVO15553 781 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-201ENST00000342245 CCDC51Q96ER9 411 aa21.02■□□□□ 0.96
SMPD1-201ENST00000342245 ZNF274Q96GC6 653 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-201ENST00000342245 AGXT2Q9BYV1 514 aa21.02■□□□□ 0.96
SMPD1-201ENST00000342245 MYO6Q9UM54 1294 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms