RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-201ENST00000342220 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
COL18A1-201ENST00000342220 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-201ENST00000342220 CTNNA3Q9UI47 895 aa15.32■□□□□ 0.04
COL18A1-201ENST00000342220 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-201ENST00000342220 PICALMQ13492 652 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 ADGRA1Q86SQ6 560 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 DBNDD1Q9H9R9 158 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 GGA1Q9UJY5 639 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 FGFR2P21802 821 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 USP5P45974 858 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 SCNN1DP51172 638 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 NLGN1Q8N2Q7 840 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 NACAP1Q9BZK3 213 aa15.31■□□□□ 0.04
COL18A1-201ENST00000342220 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
COL18A1-201ENST00000342220 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
COL18A1-201ENST00000342220 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 ZBTB22O15209 634 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 EVX2Q03828 476 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 UBE4AQ14139 1066 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 KRT32Q14532 448 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
COL18A1-201ENST00000342220 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 TCHHQ07283 1943 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 ATP2B1P20020 1258 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 TSPY26PQ9H489 355 aa15.3■□□□□ 0.04
COL18A1-201ENST00000342220 RPAP1Q9BWH6 1393 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-201ENST00000342220 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-201ENST00000342220 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
COL18A1-201ENST00000342220 SYT1P21579 422 aa15.29■□□□□ 0.04
COL18A1-201ENST00000342220 DHX32Q7L7V1 743 aaKnown RBP15.29■□□□□ 0.04
COL18A1-201ENST00000342220 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
COL18A1-201ENST00000342220 GJB4Q9NTQ9 266 aa15.29■□□□□ 0.04
COL18A1-201ENST00000342220 hCG_1642624A0A1W2PR95 340 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 DYNC1I1O14576 645 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 GRIK5Q16478 980 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 DPP8Q6V1X1 898 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 IFNL3Q8IZI9 196 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 MCM9Q9NXL9 1143 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 EPB41L2O43491 1005 aaKnown RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 LDHBP07195 334 aaKnown RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 MECOMQ03112 1051 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 TBC1D10CQ8IV04 446 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 TTC14Q96N46 770 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 GNL2Q13823 731 aaKnown RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 SYAP1Q96A49 352 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-201ENST00000342220 CNPY2Q9Y2B0 182 aa15.28■□□□□ 0.04
COL18A1-201ENST00000342220 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 USP17L21D6R901 530 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 BAG6P46379 1132 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-201ENST00000342220 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 MAPKAPK5Q8IW41 473 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 STRBPQ96SI9 672 aaKnown RBP15.27■□□□□ 0.04
COL18A1-201ENST00000342220 ZKSCAN5Q9Y2L8 839 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 RREB1Q92766 1687 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 STX6O43752 255 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 CYP2D6P10635 497 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 FAM47AQ5JRC9 791 aa15.27■□□□□ 0.04
COL18A1-201ENST00000342220 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.03
COL18A1-201ENST00000342220 ZNF500O60304 480 aaPredicted RBP15.27■□□□□ 0.03
COL18A1-201ENST00000342220 KIF20AO95235 890 aa15.27■□□□□ 0.03
COL18A1-201ENST00000342220 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.03
COL18A1-201ENST00000342220 TM4SF1P30408 202 aa15.27■□□□□ 0.03
COL18A1-201ENST00000342220 ATP2B2Q01814 1243 aa15.27■□□□□ 0.03
COL18A1-201ENST00000342220 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.03
COL18A1-201ENST00000342220 DSCC1Q9BVC3 393 aa15.27■□□□□ 0.03
COL18A1-201ENST00000342220 SENP2Q9HC62 589 aa15.27■□□□□ 0.03
COL18A1-201ENST00000342220 TAF1P21675 1872 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 ADRA2BP18089 450 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 MPNDQ8N594 471 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
COL18A1-201ENST00000342220 C21orf2O43822 256 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 IGSF3O75054 1194 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 TGFBRAP1Q8WUH2 860 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 POLLQ9UGP5 575 aa15.26■□□□□ 0.03
COL18A1-201ENST00000342220 GOLGA6L4A6NEF3 574 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 H0YIN7 160 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 MCM5P33992 734 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 ANKRD1Q15327 319 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 XDHP47989 1333 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 ERICH2A1L162 156 aa15.25■□□□□ 0.03
COL18A1-201ENST00000342220 ZSCAN22P10073 491 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-201ENST00000342220 DNM1Q05193 864 aaKnown RBP15.25■□□□□ 0.03
COL18A1-201ENST00000342220 PHKBQ93100 1093 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms