RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 SH3RF3Q8TEJ3 882 aaPredicted RBP23.08■■□□□ 1.29
GTF3C5-201ENST00000342018 CRNKL1Q9BZJ0 848 aaKnown RBP23.08■■□□□ 1.29
GTF3C5-201ENST00000342018 TNIP1Q15025 636 aa23.08■■□□□ 1.28
GTF3C5-201ENST00000342018 RNF20Q5VTR2 975 aa23.08■■□□□ 1.28
GTF3C5-201ENST00000342018 IFNL3Q8IZI9 196 aa23.08■■□□□ 1.28
GTF3C5-201ENST00000342018 SNX14Q9Y5W7 946 aa23.08■■□□□ 1.28
GTF3C5-201ENST00000342018 GJA3Q9Y6H8 435 aa23.08■■□□□ 1.28
GTF3C5-201ENST00000342018 GAKO14976 1311 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 MYO3BQ8WXR4 1341 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 GPR75-ASB3A0A0A6YYF3 556 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 TDO2P48775 406 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 HAND2P61296 217 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 FAM163AQ96GL9 167 aaPredicted RBP23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 NAPBQ9H115 298 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 EPB41L4AQ9HCS5 686 aaPredicted RBP23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 PCDHAC2Q9Y5I4 1007 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 ADAMTSL1Q8N6G6 1762 aa23.07■■□□□ 1.28
GTF3C5-201ENST00000342018 NACAP1Q9BZK3 213 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 CTNNA3Q9UI47 895 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 FZD9O00144 591 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 CYP21A2P08686 494 aa23.06■■□□□ 1.28
GTF3C5-201ENST00000342018 USP5P45974 858 aa23.05■■□□□ 1.28
GTF3C5-201ENST00000342018 PPP4CP60510 307 aa23.05■■□□□ 1.28
GTF3C5-201ENST00000342018 HHIPL2Q6UWX4 724 aa23.05■■□□□ 1.28
GTF3C5-201ENST00000342018 ANAPC15P60006 121 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 IMMTQ16891 758 aaKnown RBP23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 TEX11Q8IYF3 940 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 OGFOD1Q8N543 542 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 ZNF541Q9H0D2 1346 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 TGFBRAP1Q8WUH2 860 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 GMLQ99445 158 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 SERPINA10Q9UK55 444 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
GTF3C5-201ENST00000342018 ZNF213O14771 459 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 PLCG2P16885 1265 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 ADCK5Q3MIX3 580 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 AGBL3Q8NEM8 1001 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 USP40Q9NVE5 1235 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 SBF1O95248 1867 aa23.03■■□□□ 1.28
GTF3C5-201ENST00000342018 USP17L8P0C7I0 530 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 RHBDL3P58872 404 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 ALX1Q15699 326 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 CFAP100Q494V2 611 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 APOBEC3HQ6NTF7 200 aaKnown RBP23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 ZDHHC15Q96MV8 337 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 HDLBPQ00341 1268 aaKnown RBP23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 SLC4A8Q2Y0W8 1093 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 CERS3Q8IU89 383 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 MAPKAPK5Q8IW41 473 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 KCNB2Q92953 911 aa23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 JAKMIP1Q96N16 626 aaKnown RBP23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 DCP1AQ9NPI6 582 aaPredicted RBP23.02■■□□□ 1.28
GTF3C5-201ENST00000342018 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
GTF3C5-201ENST00000342018 MINDY4BA8MYZ0 360 aa23.01■■□□□ 1.27
GTF3C5-201ENST00000342018 MRIQ9BWK5 157 aa23.01■■□□□ 1.27
GTF3C5-201ENST00000342018 UPF3BQ9BZI7 483 aaKnown RBP23.01■■□□□ 1.27
GTF3C5-201ENST00000342018 ATP8A2Q9NTI2 1148 aa23.01■■□□□ 1.27
GTF3C5-201ENST00000342018 SHTN1A0MZ66 631 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 RABEP1Q15276 862 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 CYP2D7A0A087X1C5 515 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 CASTP20810 708 aaKnown RBP23■■□□□ 1.27
GTF3C5-201ENST00000342018 GMPSP49915 693 aaPredicted RBP23■■□□□ 1.27
GTF3C5-201ENST00000342018 PICALMQ13492 652 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 CDC42EP5Q6NZY7 148 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 MCM9Q9NXL9 1143 aa23■■□□□ 1.27
GTF3C5-201ENST00000342018 BAZ2AQ9UIF9 1905 aaKnown RBP23■■□□□ 1.27
GTF3C5-201ENST00000342018 DICER1Q9UPY3 1922 aaKnown RBP23■■□□□ 1.27
GTF3C5-201ENST00000342018 GRIN3BO60391 1043 aa22.99■■□□□ 1.27
GTF3C5-201ENST00000342018 CPA1P15085 419 aa22.99■■□□□ 1.27
GTF3C5-201ENST00000342018 ZMYM6O95789 1325 aa22.99■■□□□ 1.27
GTF3C5-201ENST00000342018 USP17L12C9JPN9 530 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 USP17L21D6R901 530 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 NEK4P51957 841 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 CACNB3P54284 484 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 CTDSPL2Q05D32 466 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 DLGAP5Q15398 846 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 STOX1Q6ZVD7 989 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 E7EWF7 191 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 GIMAP6Q6P9H5 292 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 CTR9Q6PD62 1173 aa22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 PRMT6Q96LA8 375 aaPredicted RBP22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 TDRD3Q9H7E2 651 aaKnown RBP22.98■■□□□ 1.27
GTF3C5-201ENST00000342018 RPS12P25398 132 aaKnown RBP22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 PPARAQ07869 468 aa22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 KRT32Q14532 448 aa22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 TSGA10IPQ3SY00 556 aa22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 RBM26Q5T8P6 1007 aaKnown RBP22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 NBPF3Q9H094 633 aa22.97■■□□□ 1.27
GTF3C5-201ENST00000342018 FLT1P17948 1338 aa22.96■■□□□ 1.27
GTF3C5-201ENST00000342018 SMIM22K7EJ46 135 aa22.96■■□□□ 1.27
GTF3C5-201ENST00000342018 CYP2D6P10635 497 aa22.96■■□□□ 1.27
GTF3C5-201ENST00000342018 COL9A3Q14050 684 aaPredicted RBP22.96■■□□□ 1.27
GTF3C5-201ENST00000342018 TBC1D10CQ8IV04 446 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms