RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 EXOC7Q9UPT5 735 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 INF2Q27J81 1249 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 HAUS3Q68CZ6 603 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 KIFC2Q96AC6 838 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 ELP1O95163 1332 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 TRPM2O94759 1503 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 TRAF5O00463 557 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 GGA1Q9UJY5 639 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-201ENST00000341947 LZTFL1Q9NQ48 299 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-201ENST00000341947 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-201ENST00000341947 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL11A2-201ENST00000341947 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 KCNK9Q9NPC2 374 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 CTNND2Q9UQB3 1225 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 RASA3Q14644 834 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 CNGA4Q8IV77 575 aa17.09■□□□□ 0.33
COL11A2-201ENST00000341947 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
COL11A2-201ENST00000341947 NPATQ14207 1427 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 TRPC3Q13507 836 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.33
COL11A2-201ENST00000341947 DAAM2Q86T65 1068 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 LEO1Q8WVC0 666 aaPredicted RBP17.08■□□□□ 0.33
COL11A2-201ENST00000341947 STK24Q9Y6E0 443 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 ATL3Q6DD88 541 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 FCHSD1Q86WN1 690 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 CCT6BQ92526 530 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 IVNS1ABPQ9Y6Y0 642 aa17.08■□□□□ 0.33
COL11A2-201ENST00000341947 VAV2P52735 878 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 GLT8D2Q9H1C3 349 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 A2MP01023 1474 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 E7EVH7 732 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 GCP02774 474 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 RSPH14Q9UHP6 348 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 CRCPO75575 148 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 ITGA6P23229 1130 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
COL11A2-201ENST00000341947 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
COL11A2-201ENST00000341947 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 GMNNO75496 209 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 DEXIO95424 95 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 TNFAIP3P21580 790 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 KRT9P35527 623 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 MNAT1P51948 309 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 PROCA1Q8NCQ7 364 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 HOXC9P31274 260 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 NUP160Q12769 1436 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 EIF6P56537 245 aaKnown RBP17.07■□□□□ 0.32
COL11A2-201ENST00000341947 HAUS7Q99871 368 aa17.07■□□□□ 0.32
COL11A2-201ENST00000341947 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 CERS3Q8IU89 383 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
COL11A2-201ENST00000341947 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
COL11A2-201ENST00000341947 PDE4DQ08499 809 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 NAP1L3Q99457 506 aaPredicted RBP17.06■□□□□ 0.32
COL11A2-201ENST00000341947 TLDC2A0PJX2 215 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 SPOPO43791 374 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 CCDC160A6NGH7 325 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
COL11A2-201ENST00000341947 EYA1Q99502 592 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
COL11A2-201ENST00000341947 SETDB1Q15047 1291 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 IP6K1Q92551 441 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 ARHGEF35A5YM69 484 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 B4E1Z4 1266 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 DAPK3O43293 454 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 PPP1R21Q6ZMI0 780 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 AKR1B15C9JRZ8 316 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 CHMLP26374 656 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 ARFGAP2Q8N6H7 521 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-201ENST00000341947 EYA2O00167 538 aa17.05■□□□□ 0.32
COL11A2-201ENST00000341947 STK10O94804 968 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms