RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ELP3Q9H9T3 547 aa24.86■■□□□ 1.57
SYNE2-201ENST00000341472 ALDH1A1P00352 501 aa24.85■■□□□ 1.57
SYNE2-201ENST00000341472 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.85■■□□□ 1.57
SYNE2-201ENST00000341472 SLF2Q8IX21 1173 aa24.85■■□□□ 1.57
SYNE2-201ENST00000341472 DZIP1Q86YF9 867 aaKnown RBP24.84■■□□□ 1.57
SYNE2-201ENST00000341472 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.84■■□□□ 1.57
SYNE2-201ENST00000341472 GPR108Q9NPR9 543 aa24.84■■□□□ 1.57
SYNE2-201ENST00000341472 HMG20BQ9P0W2 317 aa24.84■■□□□ 1.57
SYNE2-201ENST00000341472 CSADQ9Y600 493 aa24.84■■□□□ 1.57
SYNE2-201ENST00000341472 CCDC85CA6NKD9 419 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 GJA5P36382 358 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 TCP10Q12799 353 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 DCAF15Q66K64 600 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 ERICH6Q7L0X2 663 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 IFNL1Q8IU54 200 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 SPATA5Q8NB90 893 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 OPTNQ96CV9 577 aa24.83■■□□□ 1.57
SYNE2-201ENST00000341472 FAM163AQ96GL9 167 aaPredicted RBP24.83■■□□□ 1.57
SYNE2-201ENST00000341472 NOP58Q9Y2X3 529 aaKnown RBP24.83■■□□□ 1.57
SYNE2-201ENST00000341472 GPR25O00155 361 aa24.82■■□□□ 1.56
SYNE2-201ENST00000341472 UQCRFS1P1P0C7P4 283 aa24.82■■□□□ 1.56
SYNE2-201ENST00000341472 VGLL4Q14135 290 aa24.82■■□□□ 1.56
SYNE2-201ENST00000341472 OTUD7BQ6GQQ9 843 aa24.82■■□□□ 1.56
SYNE2-201ENST00000341472 NFIAQ12857 509 aa24.81■■□□□ 1.56
SYNE2-201ENST00000341472 NOM1Q5C9Z4 860 aaKnown RBP24.81■■□□□ 1.56
SYNE2-201ENST00000341472 MIGA2Q7L4E1 593 aa24.81■■□□□ 1.56
SYNE2-201ENST00000341472 ZNF296Q8WUU4 475 aaPredicted RBP24.81■■□□□ 1.56
SYNE2-201ENST00000341472 CFHR5Q9BXR6 569 aa24.81■■□□□ 1.56
SYNE2-201ENST00000341472 TNNI3KQ59H18 835 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 CTU1Q7Z7A3 348 aaKnown RBP24.8■■□□□ 1.56
SYNE2-201ENST00000341472 WRNIP1Q96S55 665 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 ZNF341Q9BYN7 854 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 R3HDMLQ9H3Y0 253 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 FAM198AQ9UFP1 575 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 FPGT-TNNI3KV9GXZ4 949 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 GAKO14976 1311 aa24.8■■□□□ 1.56
SYNE2-201ENST00000341472 TESPA1A2RU30 521 aaPredicted RBP24.79■■□□□ 1.56
SYNE2-201ENST00000341472 ARID4AP29374 1257 aaPredicted RBP24.79■■□□□ 1.56
SYNE2-201ENST00000341472 MECOMQ03112 1051 aa24.79■■□□□ 1.56
SYNE2-201ENST00000341472 CCDC158Q5M9N0 1113 aa24.79■■□□□ 1.56
SYNE2-201ENST00000341472 TBC1D9Q6ZT07 1266 aa24.79■■□□□ 1.56
SYNE2-201ENST00000341472 CNKSR2Q8WXI2 1034 aa24.79■■□□□ 1.56
SYNE2-201ENST00000341472 IGF2BP3O00425 579 aaKnown RBP eCLIP24.78■■□□□ 1.56
SYNE2-201ENST00000341472 LDHCP07864 332 aa24.78■■□□□ 1.56
SYNE2-201ENST00000341472 GSTO1P78417 241 aa24.78■■□□□ 1.56
SYNE2-201ENST00000341472 CEP85Q6P2H3 762 aa24.78■■□□□ 1.56
SYNE2-201ENST00000341472 ZKSCAN4Q969J2 545 aaPredicted RBP24.78■■□□□ 1.56
SYNE2-201ENST00000341472 RCAN3Q9UKA8 241 aa24.78■■□□□ 1.56
SYNE2-201ENST00000341472 CASP8AP2Q9UKL3 1982 aa24.78■■□□□ 1.56
SYNE2-201ENST00000341472 FKTNO75072 461 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 GTF2A2P52657 109 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 TTC39AQ5SRH9 613 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 PI16Q6UXB8 463 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 ZFPM1Q8IX07 1006 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 MS4A4AQ96JQ5 239 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 PTPN18Q99952 460 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 DBNDD2Q9BQY9 259 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 IDI2Q9BXS1 227 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 RAI14Q9P0K7 980 aa24.77■■□□□ 1.56
SYNE2-201ENST00000341472 ENTPD3O75355 529 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 MCAMP43121 646 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 BTDP43251 543 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 RGS3P49796 1198 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 ERO1BQ86YB8 467 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 OTUD5Q96G74 571 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 LRP2BPQ9P2M1 347 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 SNCAIPQ9Y6H5 919 aa24.76■■□□□ 1.55
SYNE2-201ENST00000341472 RPAP1Q9BWH6 1393 aaPredicted RBP24.76■■□□□ 1.55
SYNE2-201ENST00000341472 GPR75-ASB3A0A0A6YYF3 556 aa24.75■■□□□ 1.55
SYNE2-201ENST00000341472 SPDYE5A6NIY4 337 aa24.75■■□□□ 1.55
SYNE2-201ENST00000341472 SNRKQ9NRH2 765 aa24.75■■□□□ 1.55
SYNE2-201ENST00000341472 PKN2Q16513 984 aaKnown RBP24.74■■□□□ 1.55
SYNE2-201ENST00000341472 NSUN4Q96CB9 384 aaKnown RBP24.74■■□□□ 1.55
SYNE2-201ENST00000341472 ZNF112Q9UJU3 913 aa24.74■■□□□ 1.55
SYNE2-201ENST00000341472 COG6Q9Y2V7 657 aa24.74■■□□□ 1.55
SYNE2-201ENST00000341472 MROH7-TTC4A0A0A0MT08 1334 aa24.74■■□□□ 1.55
SYNE2-201ENST00000341472 ECM29Q5VYK3 1845 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 ARAP2Q8WZ64 1704 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 CCL15-CCL14A0A0B4J2E2 113 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 CCL15Q16663 113 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 ZSCAN29Q8IWY8 852 aaPredicted RBP24.73■■□□□ 1.55
SYNE2-201ENST00000341472 ZNF384Q8TF68 577 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 ZNF512BQ96KM6 892 aaPredicted RBP24.73■■□□□ 1.55
SYNE2-201ENST00000341472 CCDC8Q9H0W5 538 aaPredicted RBP24.73■■□□□ 1.55
SYNE2-201ENST00000341472 DDX19BQ9UMR2 479 aa24.73■■□□□ 1.55
SYNE2-201ENST00000341472 WDHD1O75717 1129 aaPredicted RBP24.72■■□□□ 1.55
SYNE2-201ENST00000341472 MAP4K4O95819 1239 aaPredicted RBP24.72■■□□□ 1.55
SYNE2-201ENST00000341472 INPP5BP32019 993 aa24.72■■□□□ 1.55
SYNE2-201ENST00000341472 ERC1Q8IUD2 1116 aa24.72■■□□□ 1.55
SYNE2-201ENST00000341472 EAF2Q96CJ1 260 aaPredicted RBP24.72■■□□□ 1.55
SYNE2-201ENST00000341472 CHMP4BQ9H444 224 aaKnown RBP24.72■■□□□ 1.55
SYNE2-201ENST00000341472 AKAP11Q9UKA4 1901 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 CETPP11597 493 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 RHBDL3P58872 404 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 PPATQ06203 517 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 PPIL2Q13356 520 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 HSP90AB4PQ58FF6 505 aa24.71■■□□□ 1.55
SYNE2-201ENST00000341472 RPAP2Q8IXW5 612 aaPredicted RBP24.71■■□□□ 1.55
SYNE2-201ENST00000341472 EXOC6BQ9Y2D4 811 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 219.6 ms