RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 EPS15P42566 896 aa12.73□□□□□ -0.37
TPM3-207ENST00000341372 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
TPM3-207ENST00000341372 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
TPM3-207ENST00000341372 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
TPM3-207ENST00000341372 G3V3G9 751 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 PDE8BO95263 885 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
TPM3-207ENST00000341372 FGFR2P21802 821 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
TPM3-207ENST00000341372 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 USP50Q70EL3 339 aaPredicted RBP12.72□□□□□ -0.37
TPM3-207ENST00000341372 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 GMLQ99445 158 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 CD209Q9NNX6 404 aa12.72□□□□□ -0.37
TPM3-207ENST00000341372 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
TPM3-207ENST00000341372 SRGAP3O43295 1099 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 IL1R1P14778 569 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 NDUFV2P19404 249 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 PDE3AQ14432 1141 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 DACT2Q5SW24 774 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.37
TPM3-207ENST00000341372 PLIN1O60240 522 aa12.71□□□□□ -0.38
TPM3-207ENST00000341372 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.38
TPM3-207ENST00000341372 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.38
TPM3-207ENST00000341372 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.38
TPM3-207ENST00000341372 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.38
TPM3-207ENST00000341372 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
TPM3-207ENST00000341372 HSPA6P17066 643 aa12.7□□□□□ -0.38
TPM3-207ENST00000341372 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
TPM3-207ENST00000341372 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
TPM3-207ENST00000341372 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
TPM3-207ENST00000341372 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
TPM3-207ENST00000341372 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
TPM3-207ENST00000341372 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
TPM3-207ENST00000341372 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
TPM3-207ENST00000341372 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
TPM3-207ENST00000341372 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 TDRD7Q8NHU6 1098 aaKnown RBP12.69□□□□□ -0.38
TPM3-207ENST00000341372 SIL1Q9H173 461 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 PGAP2Q9UHJ9 254 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
TPM3-207ENST00000341372 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
TPM3-207ENST00000341372 H7C1D1 291 aa12.68□□□□□ -0.38
TPM3-207ENST00000341372 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
TPM3-207ENST00000341372 TRPM4Q8TD43 1214 aa12.68□□□□□ -0.38
TPM3-207ENST00000341372 LPIN2Q92539 896 aa12.68□□□□□ -0.38
TPM3-207ENST00000341372 PASKQ96RG2 1323 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
TPM3-207ENST00000341372 GYG1P46976 350 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 MMP14P50281 582 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
TPM3-207ENST00000341372 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 UBXN4Q92575 508 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
TPM3-207ENST00000341372 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
TPM3-207ENST00000341372 SLC5A1P13866 664 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 GTF2IP78347 998 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
TPM3-207ENST00000341372 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
TPM3-207ENST00000341372 SASH1O94885 1247 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
TPM3-207ENST00000341372 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
TPM3-207ENST00000341372 ATP2B3Q16720 1220 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 EGFRP00533 1210 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
TPM3-207ENST00000341372 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
TPM3-207ENST00000341372 TRPM7Q96QT4 1865 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 CD46P15529 392 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 SERPINB4P48594 390 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 APLP1P51693 650 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
TPM3-207ENST00000341372 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
TPM3-207ENST00000341372 KIF4BQ2VIQ3 1234 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 NAALADL2Q58DX5 795 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 MAP1SQ66K74 1059 aaPredicted RBP12.65□□□□□ -0.38
TPM3-207ENST00000341372 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
TPM3-207ENST00000341372 COL1A1P02452 1464 aaPredicted RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 BCAMP50895 628 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 CNTROBQ8N137 903 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 PDCD7Q8N8D1 485 aaKnown RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms