RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 RUFY3Q7L099 469 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 IWS1Q96ST2 819 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 PUF60Q9UHX1 559 aaKnown RBP8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 COMMD10Q9Y6G5 202 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 AATKQ6ZMQ8 1374 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 ZBED4O75132 1171 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 HLTFQ14527 1009 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 TNNI3KQ59H18 835 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 KBTBD3Q8NAB2 608 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 CSRNP2Q9H175 543 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 FPGT-TNNI3KV9GXZ4 949 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 TNNT1P13805 278 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 LIG1P18858 919 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 TUBB2AQ13885 445 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 VTI1AQ96AJ9 217 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 TUBB2BQ9BVA1 445 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
ATP2B4-201ENST00000341360 SEMA3EO15041 775 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CHMLP26374 656 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CCDC144CPQ8IYA2 1237 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CEP112Q8N8E3 955 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CABLES1Q8TDN4 633 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 BICC1Q9H694 974 aaKnown RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ARPP21Q9UBL0 812 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 USP21Q9UK80 565 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ELP1O95163 1332 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 F8W031 263 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 MBD4O95243 580 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 SV2BQ7L1I2 683 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 NEK11Q8NG66 645 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 IFT74Q96LB3 600 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 LMBRD1Q9NUN5 540 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 MYCNP04198 464 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 KIF5AQ12840 1032 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 NOLC1Q14978 699 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 C6orf163Q5TEZ5 329 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 ZNF772Q68DY9 489 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CNGA4Q8IV77 575 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CHURC1Q8WUH1 139 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 NOX5Q96PH1 765 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 TSGA10Q9BZW7 698 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 EFCAB6Q5THR3 1501 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 H0YCG3 227 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 BACH1O14867 736 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 LMAN1P49257 510 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 CNNM4Q6P4Q7 775 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 TTC14Q96N46 770 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 NAP1L3Q99457 506 aaPredicted RBP8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 FRMD4BQ9Y2L6 1034 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 TET3O43151 1660 aa8.69□□□□□ -1.02
ATP2B4-201ENST00000341360 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 H7C1D1 291 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 ATP2A2P16615 1042 aaKnown RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 HOXA7P31268 230 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 GRM1Q13255 1194 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 TCIRG1Q13488 830 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 CWF19L2Q2TBE0 894 aaKnown RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 GPHNQ9NQX3 736 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 SSH2Q76I76 1423 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 STX10O60499 249 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 IBSPP21815 317 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 ADCY5O95622 1261 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 EPB41P11171 864 aaKnown RBP8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 GCKRQ14397 625 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 GALNT17Q6IS24 598 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 ATP7BP35670 1465 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 FAM135BQ49AJ0 1406 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 FAM193AP78312 1265 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 WDR44Q5JSH3 913 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 CROCCP2Q86T23 111 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 MTUS1Q9ULD2 1270 aa8.68□□□□□ -1.02
ATP2B4-201ENST00000341360 KIAA1210Q9ULL0 1709 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 RNF17Q9BXT8 1623 aaKnown RBP8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 PLS1Q14651 629 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 GPR162Q16538 588 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 MPNDQ8N594 471 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 CCDC42Q96M95 316 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 CTAGE15A4D2H0 777 aa8.67□□□□□ -1.02
ATP2B4-201ENST00000341360 BIN1O00499 593 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms