RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 USP40Q9NVE5 1235 aa18.58■□□□□ 0.57
UBE3B-201ENST00000340074 FOCADQ5VW36 1801 aa18.58■□□□□ 0.56
UBE3B-201ENST00000340074 CNTNAP1P78357 1384 aa18.58■□□□□ 0.56
UBE3B-201ENST00000340074 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
UBE3B-201ENST00000340074 LDHCP07864 332 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 BTDP43251 543 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 TNNI2P48788 182 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 NAA16Q6N069 864 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-201ENST00000340074 KLRG1Q96E93 195 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 ECHDC1Q9NTX5 307 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 GOLIM4O00461 696 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 NF2P35240 595 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 SMC5Q8IY18 1101 aa18.57■□□□□ 0.56
UBE3B-201ENST00000340074 EDC3Q96F86 508 aaKnown RBP18.57■□□□□ 0.56
UBE3B-201ENST00000340074 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
UBE3B-201ENST00000340074 SSC5DA1L4H1 1573 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 HUNKP57058 714 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-201ENST00000340074 NBPF12Q5TAG4 269 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-201ENST00000340074 FKBP1CQ5VVH2 108 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 TSHZ3Q63HK5 1081 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-201ENST00000340074 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 HAUS7Q99871 368 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 TMEM39BQ9GZU3 492 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 PAG1Q9NWQ8 432 aa18.56■□□□□ 0.56
UBE3B-201ENST00000340074 IGSF3O75054 1194 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 TCP10Q12799 353 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 MAP3K12Q12852 859 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 NFIAQ12857 509 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 PRKG1Q13976 671 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-201ENST00000340074 B4GALNT3Q6L9W6 998 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 MOB2Q70IA6 237 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 ADGRA1Q86SQ6 560 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 MAGEB6Q8N7X4 407 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 TEPSINQ96N21 525 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 OTOFQ9HC10 1997 aa18.55■□□□□ 0.56
UBE3B-201ENST00000340074 RHBDL3P58872 404 aa18.54■□□□□ 0.56
UBE3B-201ENST00000340074 FKBP1BP68106 108 aa18.54■□□□□ 0.56
UBE3B-201ENST00000340074 SUPT20HL1Q3ZLR7 823 aa18.54■□□□□ 0.56
UBE3B-201ENST00000340074 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
UBE3B-201ENST00000340074 FAM198AQ9UFP1 575 aa18.54■□□□□ 0.56
UBE3B-201ENST00000340074 FZD1Q9UP38 647 aa18.54■□□□□ 0.56
UBE3B-201ENST00000340074 CYP7A1P22680 504 aa18.53■□□□□ 0.56
UBE3B-201ENST00000340074 VEGFBP49765 207 aa18.53■□□□□ 0.56
UBE3B-201ENST00000340074 HHIPL1Q96JK4 782 aa18.53■□□□□ 0.56
UBE3B-201ENST00000340074 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
UBE3B-201ENST00000340074 AATFQ9NY61 560 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBE3B-201ENST00000340074 RFX7Q2KHR2 1363 aa18.53■□□□□ 0.56
UBE3B-201ENST00000340074 UBE2Q2LH0YL09 131 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 IDI2Q9BXS1 227 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 LNPKQ9C0E8 428 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 SALL3Q9BXA9 1300 aa18.52■□□□□ 0.56
UBE3B-201ENST00000340074 MYH1P12882 1939 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-201ENST00000340074 WDHD1O75717 1129 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-201ENST00000340074 BAG3O95817 575 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 MX1P20591 662 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 RGS3P49796 1198 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 GRM1Q13255 1194 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 ZFPM1Q8IX07 1006 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 FAM151AQ8WW52 585 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 CAPNS2Q96L46 248 aa18.51■□□□□ 0.55
UBE3B-201ENST00000340074 ANGEL1Q9UNK9 670 aaKnown RBP18.51■□□□□ 0.55
UBE3B-201ENST00000340074 RPAP1Q9BWH6 1393 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-201ENST00000340074 PPP4CP60510 307 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 NUCB1Q02818 461 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 PICALMQ13492 652 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 SLC9C2Q5TAH2 1124 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 PI4K2BQ8TCG2 481 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 SH3RF3Q8TEJ3 882 aaPredicted RBP18.5■□□□□ 0.55
UBE3B-201ENST00000340074 DDX4Q9NQI0 724 aaKnown RBP18.5■□□□□ 0.55
UBE3B-201ENST00000340074 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
UBE3B-201ENST00000340074 THSD7BQ9C0I4 1608 aa18.5■□□□□ 0.55
UBE3B-201ENST00000340074 ERC2O15083 957 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 ENTPD3O75355 529 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 PDE6AP16499 860 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 RGMBQ6NW40 437 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 MIGA1Q8NAN2 632 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 USP2O75604 605 aaPredicted RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 GLRX3O76003 335 aaKnown RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 PLCG2P16885 1265 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 ECE1P42892 770 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 ZNF157P51786 506 aaPredicted RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
UBE3B-201ENST00000340074 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
UBE3B-201ENST00000340074 TCRBV5S4A2TA0A5A2 114 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms