RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
RPGR-202ENST00000339363 AKAP2Q9Y2D5 859 aa10.62□□□□□ -0.71
RPGR-202ENST00000339363 EZRP15311 586 aaKnown RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 SCRN1Q12765 414 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 CEMIPQ8WUJ3 1361 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 RNF40O75150 1001 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 RESTQ13127 1097 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 PLEKHO1Q53GL0 409 aaPredicted RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 ABCB6Q9NP58 842 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 RPSAP08865 295 aaKnown RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 SARM1Q6SZW1 724 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 DHX40Q8IX18 779 aaKnown RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
RPGR-202ENST00000339363 DHX58Q96C10 678 aa10.61□□□□□ -0.71
RPGR-202ENST00000339363 KIF5CO60282 957 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 TAF5LO75529 589 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CYP21A2P08686 494 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 GSCP56915 257 aaPredicted RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 ACTN3Q08043 901 aaPredicted RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 RBM43Q6ZSC3 357 aaKnown RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 FAM76AQ8TAV0 307 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 SPATS2LQ9NUQ6 558 aaKnown RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CBFA2T2O43439 604 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 PDIA6Q15084 440 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CEP112Q8N8E3 955 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 C9orf78Q9NZ63 289 aaPredicted RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 GOLGA6L9A6NEM1 432 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 BTBD11A6QL63 1104 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 ZEB2O60315 1214 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 ATP2C2O75185 946 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 MYL6BP14649 208 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CASP8Q14790 479 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 E2F5Q15329 346 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 NBPF20Q3BBV1 942 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 ARMCX5Q6P1M9 558 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CPLX2Q6PUV4 134 aaKnown RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 KIRREL3Q8IZU9 778 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 FSD1Q9BTV5 496 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
RPGR-202ENST00000339363 DBNLQ9UJU6 430 aaKnown RBP10.6□□□□□ -0.71
RPGR-202ENST00000339363 NEDD4P46934 1319 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CTAGE15A4D2H0 777 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 IRF6O14896 467 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CTAGE8P0CG41 777 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CCDC93Q567U6 631 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 Q6ZUG5 572 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CTAGE6Q86UF2 777 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CTAGE4Q8IX94 777 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 ZNF142P52746 1687 aaPredicted RBP10.59□□□□□ -0.71
RPGR-202ENST00000339363 NAP1L1P55209 391 aaKnown RBP10.59□□□□□ -0.71
RPGR-202ENST00000339363 DDX46Q7L014 1031 aaKnown RBP10.59□□□□□ -0.71
RPGR-202ENST00000339363 DESI2Q9BSY9 194 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 PPP2R2CQ9Y2T4 447 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 ZNF609O15014 1411 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 MED23Q9ULK4 1368 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 KCNA6P17658 529 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 CPLX3Q8WVH0 158 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
RPGR-202ENST00000339363 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
RPGR-202ENST00000339363 IQCA1Q86XH1 822 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 PARP3Q9Y6F1 533 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 CHUKO15111 745 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
RPGR-202ENST00000339363 PSMA5P28066 241 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 FANCCQ00597 558 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 STK38Q15208 465 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 TSGA10IPQ3SY00 556 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 MIEF2Q96C03 454 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 WDR24Q96S15 920 aa10.58□□□□□ -0.72
RPGR-202ENST00000339363 GOLGA6CA6NDK9 693 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 MYO1FO00160 1098 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 EXOC5O00471 708 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 SKAP2O75563 359 aaPredicted RBP10.57□□□□□ -0.72
RPGR-202ENST00000339363 GOLGA6DP0CG33 693 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 ZNF569Q5MCW4 686 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 GOLGA6AQ9NYA3 693 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 PXDNLA1KZ92 1463 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 MTX1Q13505 466 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 BAG1Q99933 345 aaPredicted RBP10.57□□□□□ -0.72
RPGR-202ENST00000339363 SLC3A2P08195 630 aaKnown RBP10.57□□□□□ -0.72
RPGR-202ENST00000339363 GNGT1P63211 74 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 TFCP2Q12800 502 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 KAT2BQ92831 832 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms