RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
PDLIM2-203ENST00000339162 GPT2Q8TD30 523 aa26.41■■□□□ 1.82
PDLIM2-203ENST00000339162 PDCP20941 246 aa26.41■■□□□ 1.82
PDLIM2-203ENST00000339162 SENP2Q9HC62 589 aa26.41■■□□□ 1.82
PDLIM2-203ENST00000339162 TOMM22Q9NS69 142 aa26.41■■□□□ 1.82
PDLIM2-203ENST00000339162 PPEF1O14829 653 aaPredicted RBP26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 KDM4AO75164 1064 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 ATP2B4P23634 1241 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 EVCP57679 992 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 GRIK5Q16478 980 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 AKNAD1Q5T1N1 836 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 SMARCC2Q8TAQ2 1214 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 ANKRD31Q8N7Z5 1873 aa26.4■■□□□ 1.82
PDLIM2-203ENST00000339162 PTPDC1A2A3K4 754 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 SRGNP10124 158 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 FOSBP53539 338 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 MFSD6Q6ZSS7 791 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 TBC1D16Q8TBP0 767 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 ZSWIM5Q9P217 1185 aa26.39■■□□□ 1.82
PDLIM2-203ENST00000339162 GOLGA8BA8MQT2 603 aa26.39■■□□□ 1.81
PDLIM2-203ENST00000339162 C6orf229H3BNL8 230 aa26.39■■□□□ 1.81
PDLIM2-203ENST00000339162 DZIP1Q86YF9 867 aaKnown RBP26.39■■□□□ 1.81
PDLIM2-203ENST00000339162 GOLGB1Q14789 3259 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 CYP2D7A0A087X1C5 515 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 DNM1Q05193 864 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 PPARAQ07869 468 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 TPRNQ4KMQ1 711 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 FAM173BQ6P4H8 233 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 USP48Q86UV5 1035 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 FAM184AQ8NB25 1140 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 LLPHQ9BRT6 129 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 CD209Q9NNX6 404 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 HPS5Q9UPZ3 1129 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 TCHHQ07283 1943 aa26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 ANGEL1Q9UNK9 670 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-203ENST00000339162 WDR19Q8NEZ3 1342 aa26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 CAVIN1Q6NZI2 390 aaKnown RBP26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 C15orf52Q6ZUT6 534 aaKnown RBP26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 SH2B2O14492 632 aaPredicted RBP26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 GADD45BO75293 160 aaPredicted RBP26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 WDR66Q8TBY9 1149 aa26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 CAMKK2Q96RR4 588 aa26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 PODXL2Q9NZ53 605 aa26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 ATP6V1DQ9Y5K8 247 aa26.37■■□□□ 1.81
PDLIM2-203ENST00000339162 LDHBP07195 334 aaKnown RBP26.36■■□□□ 1.81
PDLIM2-203ENST00000339162 RXRAP19793 462 aa26.36■■□□□ 1.81
PDLIM2-203ENST00000339162 STAG1Q8WVM7 1258 aa26.36■■□□□ 1.81
PDLIM2-203ENST00000339162 ZKSCAN3Q9BRR0 538 aa26.36■■□□□ 1.81
PDLIM2-203ENST00000339162 FIBPO43427 364 aa26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 DIXDC1Q155Q3 683 aa26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 SLC15A2Q16348 729 aa26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 SPTY2D1Q68D10 685 aaPredicted RBP26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 IGDCC4Q8TDY8 1250 aa26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 RBM27Q9P2N5 1060 aaKnown RBP26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 SP8Q8IXZ3 490 aa26.35■■□□□ 1.81
PDLIM2-203ENST00000339162 RIMBP2O15034 1052 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 NPR1P16066 1061 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 EVX2Q03828 476 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 TMEM67Q5HYA8 995 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 CNNM2Q9H8M5 875 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 ATP6V0A2Q9Y487 856 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 H3BQV1 296 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 PDE6BP35913 854 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 IFFO2Q5TF58 517 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 KRT23Q9C075 422 aa26.34■■□□□ 1.81
PDLIM2-203ENST00000339162 NRXN2Q9P2S2 1712 aa26.33■■□□□ 1.81
PDLIM2-203ENST00000339162 SALL1Q9NSC2 1324 aa26.33■■□□□ 1.81
PDLIM2-203ENST00000339162 IFIT3O14879 490 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 CCDC144CPQ8IYA2 1237 aa26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 TMEM87BQ96K49 555 aa26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 MYL10Q9BUA6 226 aa26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 LY9Q9HBG7 655 aa26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 BAZ2AQ9UIF9 1905 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-203ENST00000339162 USP17L12C9JPN9 530 aa26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 USP17L21D6R901 530 aa26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 FDPSP14324 419 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 HMGN5P82970 282 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 CTR9Q6PD62 1173 aa26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 ZNF622Q969S3 477 aaKnown RBP eCLIP26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 CHD4Q14839 1912 aa26.32■■□□□ 1.8
PDLIM2-203ENST00000339162 IL1R1P14778 569 aa26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 SLC4A8Q2Y0W8 1093 aa26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 CRNKL1Q9BZJ0 848 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 TIAM2Q8IVF5 1701 aa26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 PDIA4P13667 645 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 APOA5Q6Q788 366 aa26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 MICU3Q86XE3 530 aa26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 DCP1AQ9NPI6 582 aaPredicted RBP26.31■■□□□ 1.8
PDLIM2-203ENST00000339162 PRDM1O75626 825 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 GUCY1B3Q02153 619 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 TMC4Q7Z404 712 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 PDGFDQ9GZP0 370 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 RNF41Q9H4P4 317 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 CPLX1O14810 134 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 ZBTB22O15209 634 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 ALDH1B1P30837 517 aa26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 ADD1P35611 737 aaKnown RBP26.3■■□□□ 1.8
PDLIM2-203ENST00000339162 MASTLQ96GX5 879 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms