RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 PPATQ06203 517 aa14.44□□□□□ -0.1
CSMD2-202ENST00000338325 HHIPL2Q6UWX4 724 aa14.44□□□□□ -0.1
CSMD2-202ENST00000338325 PUM3Q15397 648 aaKnown RBP14.43□□□□□ -0.1
CSMD2-202ENST00000338325 C17orf99Q6UX52 265 aa14.43□□□□□ -0.1
CSMD2-202ENST00000338325 COLQQ9Y215 455 aaPredicted RBP14.43□□□□□ -0.1
CSMD2-202ENST00000338325 IFIT1P09914 478 aaKnown RBP14.42□□□□□ -0.1
CSMD2-202ENST00000338325 FGFR2P21802 821 aa14.42□□□□□ -0.1
CSMD2-202ENST00000338325 INPP5BP32019 993 aa14.42□□□□□ -0.1
CSMD2-202ENST00000338325 ANKRD23Q86SG2 305 aa14.42□□□□□ -0.1
CSMD2-202ENST00000338325 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.42□□□□□ -0.1
CSMD2-202ENST00000338325 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
CSMD2-202ENST00000338325 ANP32CO43423 234 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 WDR66Q8TBY9 1149 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 FAM151AQ8WW52 585 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 CPA4Q9UI42 421 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 PTPRCP08575 1304 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 ADGRA2Q96PE1 1338 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 H0YGN5 161 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 CTGFP29279 349 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 MRPL50Q8N5N7 158 aaKnown RBP14.41□□□□□ -0.1
CSMD2-202ENST00000338325 TRIM47Q96LD4 638 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 KCNH4Q9UQ05 1017 aa14.41□□□□□ -0.1
CSMD2-202ENST00000338325 PDHXO00330 501 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
CSMD2-202ENST00000338325 SLC5A1P13866 664 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 PSMC4P43686 418 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 DAGLAQ9Y4D2 1042 aa14.4□□□□□ -0.1
CSMD2-202ENST00000338325 PTPRFP10586 1907 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 CEP290O15078 2479 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 OSBPP22059 807 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 HOXD10P28358 340 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
CSMD2-202ENST00000338325 TCP10Q12799 353 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 MTFR1Q15390 333 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 NOL9Q5SY16 702 aaKnown RBP14.39□□□□□ -0.11
CSMD2-202ENST00000338325 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 LPIN2Q92539 896 aa14.39□□□□□ -0.11
CSMD2-202ENST00000338325 MYPNQ86TC9 1320 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 EYA2O00167 538 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
CSMD2-202ENST00000338325 GRK4P32298 578 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 MOGSQ13724 837 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 DIXDC1Q155Q3 683 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 NKX2-3Q8TAU0 364 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 USP44Q9H0E7 712 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
CSMD2-202ENST00000338325 RFX5P48382 616 aaPredicted RBP14.37□□□□□ -0.11
CSMD2-202ENST00000338325 NFIAQ12857 509 aa14.37□□□□□ -0.11
CSMD2-202ENST00000338325 FAM9BQ8IZU0 186 aa14.37□□□□□ -0.11
CSMD2-202ENST00000338325 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
CSMD2-202ENST00000338325 PHIPQ8WWQ0 1821 aa14.37□□□□□ -0.11
CSMD2-202ENST00000338325 PRDX5P30044 214 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 FAM198AQ9UFP1 575 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 TRIOBPQ9H2D6 2365 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 CXCL11O14625 94 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 LDHBP07195 334 aaKnown RBP14.36□□□□□ -0.11
CSMD2-202ENST00000338325 GJB1P08034 283 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 BCRP11274 1271 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 CCL5P13501 91 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 GJA8P48165 433 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 DPF3Q92784 378 aa14.36□□□□□ -0.11
CSMD2-202ENST00000338325 GNL3LQ9NVN8 582 aaKnown RBP14.36□□□□□ -0.11
CSMD2-202ENST00000338325 SALL1Q9NSC2 1324 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 FCGRTP55899 365 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 UBXN2AP68543 259 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 PRKCZQ05513 592 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 HTATIP2Q9BUP3 242 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 USP40Q9NVE5 1235 aa14.35□□□□□ -0.11
CSMD2-202ENST00000338325 BIN2Q9UBW5 565 aaPredicted RBP14.35□□□□□ -0.11
CSMD2-202ENST00000338325 CYP2C8P10632 490 aa14.34□□□□□ -0.11
CSMD2-202ENST00000338325 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
CSMD2-202ENST00000338325 RNF208Q9H0X6 261 aa14.34□□□□□ -0.11
CSMD2-202ENST00000338325 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
CSMD2-202ENST00000338325 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
CSMD2-202ENST00000338325 SEMA3EO15041 775 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 CIAO1O76071 339 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 FASTKD5Q7L8L6 764 aaKnown RBP14.33□□□□□ -0.12
CSMD2-202ENST00000338325 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
CSMD2-202ENST00000338325 ZFPM1Q8IX07 1006 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 SIL1Q9H173 461 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
CSMD2-202ENST00000338325 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 ENTPD3O75355 529 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms