RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
RBM39-202ENST00000338163 HAND2P61296 217 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 MYD88Q99836 296 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 RSPH14Q9UHP6 348 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
RBM39-202ENST00000338163 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
RBM39-202ENST00000338163 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 E7EWF7 191 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 CPLX1O14810 134 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 TPM1P09493 284 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 KCNJ6P48051 423 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 SLC20A2Q08357 652 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 PPP2R2CQ9Y2T4 447 aa13.63□□□□□ -0.23
RBM39-202ENST00000338163 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
RBM39-202ENST00000338163 NKX1-1Q15270 411 aaPredicted RBP13.62□□□□□ -0.23
RBM39-202ENST00000338163 REXO1L1PQ8IX06 675 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 RASSF4Q9H2L5 321 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
RBM39-202ENST00000338163 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 MYL5Q02045 173 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 PNOCQ13519 176 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 MCM6Q14566 821 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
RBM39-202ENST00000338163 AK7Q96M32 723 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 PARD6BQ9BYG5 372 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
RBM39-202ENST00000338163 VWA3AA6NCI4 1184 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 SYKP43405 635 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
RBM39-202ENST00000338163 MYSM1Q5VVJ2 828 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 FANCLQ9NW38 375 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
RBM39-202ENST00000338163 NEDD4P46934 1319 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 GLI3P10071 1580 aa13.61□□□□□ -0.23
RBM39-202ENST00000338163 RXRBP28702 533 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 ADKP55263 362 aaKnown RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 KBTBD3Q8NAB2 608 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 MYO1CO00159 1063 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 GCKRQ14397 625 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 DHX58Q96C10 678 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 BAG1Q99933 345 aaPredicted RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 HSD3B7Q9H2F3 369 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 ADAM21Q9UKJ8 722 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 ONECUT3O60422 494 aaPredicted RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 YEATS4O95619 227 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 EXOSC10Q01780 885 aaKnown RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 HAUS7Q99871 368 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 POLR3EQ9NVU0 708 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 VPS18Q9P253 973 aa13.6□□□□□ -0.23
RBM39-202ENST00000338163 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
RBM39-202ENST00000338163 KLF18A0A0U1RQI7 1052 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 IKBKBO14920 756 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 VSTM4Q8IW00 320 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
RBM39-202ENST00000338163 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 LONRF2Q1L5Z9 754 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 MUM1L1Q5H9M0 696 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 PIGBQ92521 554 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 GOLGA1Q92805 767 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
RBM39-202ENST00000338163 FUT8Q9BYC5 575 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 LZTFL1Q9NQ48 299 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
RBM39-202ENST00000338163 H3BQF6 201 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 KCNQ2O43526 872 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms