RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LMBR1LQ6UX01 489 aa13.79□□□□□ -0.2
FN1-202ENST00000336916 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
FN1-202ENST00000336916 SPTLC2O15270 562 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 PDE8AO60658 829 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 GNPATO15228 680 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 GCP02774 474 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 ELP1O95163 1332 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
FN1-202ENST00000336916 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 SMC6Q96SB8 1091 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 ADCY5O95622 1261 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
FN1-202ENST00000336916 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
FN1-202ENST00000336916 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.2
FN1-202ENST00000336916 CCDC42Q96M95 316 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 KMT5BQ4FZB7 885 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.2
FN1-202ENST00000336916 SDSP20132 328 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 TEX11Q8IYF3 940 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 NUP58Q9BVL2 599 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 ZWINTO95229 277 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 DEXIO95424 95 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 NUCKS1Q9H1E3 243 aaKnown RBP13.77□□□□□ -0.21
FN1-202ENST00000336916 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 H0YCG3 227 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.21
FN1-202ENST00000336916 DCAF15Q66K64 600 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
FN1-202ENST00000336916 CEP152O94986 1710 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
FN1-202ENST00000336916 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 NIM1KQ8IY84 436 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 MIS12Q9H081 205 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 CD2APQ9Y5K6 639 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 H7C1D1 291 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 UBL4BQ8N7F7 174 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
FN1-202ENST00000336916 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 DYNC1I1O14576 645 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 NSMCE1Q8WV22 266 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 FEZ2Q9UHY8 353 aaPredicted RBP13.76□□□□□ -0.21
FN1-202ENST00000336916 NR1I2O75469 434 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 HSPA4P34932 840 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 KDM3AQ9Y4C1 1321 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
FN1-202ENST00000336916 GIPC1O14908 333 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 RUFY3Q7L099 469 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 GNA14O95837 355 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
FN1-202ENST00000336916 GNG11P61952 73 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 OTUD6AQ7L8S5 288 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 ARFGAP2Q8N6H7 521 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 METTL22Q9BUU2 404 aaPredicted RBP13.75□□□□□ -0.21
FN1-202ENST00000336916 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
FN1-202ENST00000336916 TNNC1P63316 161 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 SEL1L2Q5TEA6 688 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
FN1-202ENST00000336916 VAV2P52735 878 aa13.75□□□□□ -0.21
FN1-202ENST00000336916 TTC37Q6PGP7 1564 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 BCRP11274 1271 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 TRPC3Q13507 836 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 CCDC50Q8IVM0 306 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 ZNF830Q96NB3 372 aaPredicted RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 CTAGE15A4D2H0 777 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 ZBED4O75132 1171 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 CTAGE8P0CG41 777 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 INF2Q27J81 1249 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 CTAGE6Q86UF2 777 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 CTAGE4Q8IX94 777 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 BRF1Q92994 677 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 AZI2Q9H6S1 392 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 ANGEL1Q9UNK9 670 aaKnown RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 INSRP06213 1382 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 MAP7Q14244 749 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 NT5C2P49902 561 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 KIF22Q14807 665 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms