RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.75
SNCA-201ENST00000336904 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.75
SNCA-201ENST00000336904 ZNF165P49910 485 aa10.33□□□□□ -0.75
SNCA-201ENST00000336904 NDUFA8P51970 172 aa10.33□□□□□ -0.75
SNCA-201ENST00000336904 HMGN5P82970 282 aaKnown RBP10.33□□□□□ -0.75
SNCA-201ENST00000336904 MAP3K12Q12852 859 aa10.33□□□□□ -0.75
SNCA-201ENST00000336904 LRRFIP1Q32MZ4 808 aaKnown RBP10.33□□□□□ -0.75
SNCA-201ENST00000336904 ALG1Q9BT22 464 aa10.33□□□□□ -0.75
SNCA-201ENST00000336904 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.75
SNCA-201ENST00000336904 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 GOLGA8AA7E2F4 631 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 ARID5BQ14865 1188 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 APOA5Q6Q788 366 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 CFAP45Q9UL16 551 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 ELP1O95163 1332 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 ABCC12Q96J65 1359 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 TTF1Q15361 905 aaPredicted RBP10.33□□□□□ -0.76
SNCA-201ENST00000336904 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 KCNF1Q9H3M0 494 aa10.33□□□□□ -0.76
SNCA-201ENST00000336904 ZSCAN16Q9H4T2 348 aaPredicted RBP10.33□□□□□ -0.76
SNCA-201ENST00000336904 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 SH2B2O14492 632 aaPredicted RBP10.32□□□□□ -0.76
SNCA-201ENST00000336904 LETM1O95202 739 aaPredicted RBP10.32□□□□□ -0.76
SNCA-201ENST00000336904 HSP90AA4PQ58FG1 418 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 NAA16Q6N069 864 aaPredicted RBP10.32□□□□□ -0.76
SNCA-201ENST00000336904 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 FAM200AQ8TCP9 573 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
SNCA-201ENST00000336904 UQCRFS1P1P0C7P4 283 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 MYH7P12883 1935 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 SNW1Q13573 536 aaKnown RBP10.32□□□□□ -0.76
SNCA-201ENST00000336904 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 SDF4Q9BRK5 362 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
SNCA-201ENST00000336904 MROH7-TTC4A0A0A0MT08 1334 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 ZBTB43O43298 467 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 NMT2O60551 498 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 KINO60870 393 aaKnown RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 LY9Q9HBG7 655 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 MYSM1Q5VVJ2 828 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 KRT40Q6A162 431 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 IGDCC4Q8TDY8 1250 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 DDX19AQ9NUU7 478 aaKnown RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 COL1A1P02452 1464 aaPredicted RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 CCDC69A6NI79 296 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 OFD1O75665 1012 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 WDHD1O75717 1129 aaPredicted RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 CCDC186Q7Z3E2 898 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
SNCA-201ENST00000336904 RCOR1Q9UKL0 485 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 SLC12A7Q9Y666 1083 aa10.31□□□□□ -0.76
SNCA-201ENST00000336904 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
SNCA-201ENST00000336904 CYP2D6P10635 497 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 PRDX5P30044 214 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
SNCA-201ENST00000336904 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 NR5A1Q13285 461 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
SNCA-201ENST00000336904 AATFQ9NY61 560 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNCA-201ENST00000336904 MINPP1Q9UNW1 487 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
SNCA-201ENST00000336904 GRIN1Q05586 938 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 AOPEPQ8N6M6 819 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 LINC00301Q8NCQ3 95 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 KIF3AQ9Y496 699 aa10.3□□□□□ -0.76
SNCA-201ENST00000336904 BTBD18B2RXH4 712 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 SPTLC2O15270 562 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 DPCR1Q3MIW9 517 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 AKNAD1Q5T1N1 836 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 NOM1Q5C9Z4 860 aaKnown RBP10.29□□□□□ -0.76
SNCA-201ENST00000336904 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 OXER1Q8TDS5 423 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 FAM13BQ9NYF5 915 aa10.29□□□□□ -0.76
SNCA-201ENST00000336904 CCNL1Q9UK58 526 aaPredicted RBP10.29□□□□□ -0.76
SNCA-201ENST00000336904 UQCRHLA0A096LP55 91 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 FOXN1O15353 648 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 UQCRHP07919 91 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 MRPS27Q92552 414 aaKnown RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms