RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GOLGA8KD6RF30 607 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 BAG2O95816 211 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 NAPAP54920 295 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 BRD3Q15059 726 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 AKNAD1Q5T1N1 836 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 RASIP1Q5U651 963 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 PHLDB3Q6NSJ2 640 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-201ENST00000334504 MEIS3Q99687 375 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 CSRNP2Q9H175 543 aa10.96□□□□□ -0.65
COL4A6-201ENST00000334504 SBNO2Q9Y2G9 1366 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 I3L4J1 428 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 RASSF2P50749 326 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 CREB3L3Q68CJ9 461 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 IMPG2Q9BZV3 1241 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 VEZTQ9HBM0 779 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.66
COL4A6-201ENST00000334504 CEP104O60308 925 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 TBC1D8BQ0IIM8 1120 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 RASA3Q14644 834 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ASIC2Q16515 512 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ITIH3Q06033 890 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 KRT71Q3SY84 523 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL4A6-201ENST00000334504 RRP15Q9Y3B9 282 aaKnown RBP10.95□□□□□ -0.66
COL4A6-201ENST00000334504 SLC4A4Q9Y6R1 1079 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 PLS1Q14651 629 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 PIK3R4Q99570 1358 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 CALM1P0DP23 149 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 CALM2P0DP24 149 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 CALM3P0DP25 149 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 KRT79Q5XKE5 535 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 MPRIPQ6WCQ1 1025 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 SPATS2Q86XZ4 545 aaKnown RBP10.95□□□□□ -0.66
COL4A6-201ENST00000334504 USP26Q9BXU7 913 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 STX8Q9UNK0 236 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 RNF40O75150 1001 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 RAPGEF3O95398 923 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 CLTAP09496 248 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 GUCY2FP51841 1108 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ZBTB17Q13105 803 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ANKRD20A3Q5VUR7 823 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 CXorf38Q8TB03 319 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ESR2Q92731 530 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 ZNF652Q9Y2D9 606 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 MTX1Q13505 466 aa10.95□□□□□ -0.66
COL4A6-201ENST00000334504 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
COL4A6-201ENST00000334504 XAB2Q9HCS7 855 aaKnown RBP10.95□□□□□ -0.66
COL4A6-201ENST00000334504 C9orf84Q5VXU9 1444 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ARHGAP6O43182 974 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 DENND2CQ68D51 928 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 IQUBQ8NA54 791 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 SMARCC2Q8TAQ2 1214 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 FAM204AQ9H8W3 233 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 UBL4BQ8N7F7 174 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ABTB1Q969K4 478 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-201ENST00000334504 RILPQ96NA2 401 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ARHGAP42A6NI28 874 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 SPECC1L-ADORA2AF8WAN1 911 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 MGEA5O60502 916 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-201ENST00000334504 LDHAL6AQ6ZMR3 332 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
COL4A6-201ENST00000334504 VCX3AQ9NNX9 186 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 EMILIN1Q9Y6C2 1016 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-201ENST00000334504 RFX1P22670 979 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 PPP2R5AQ15172 486 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 KRT5P13647 590 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 KRT15P19012 456 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 STX2P32856 288 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 NLRP12P59046 1061 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 VWA3BQ502W6 1294 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 TTC19Q6DKK2 380 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-201ENST00000334504 RASEFQ8IZ41 740 aa10.94□□□□□ -0.66
COL4A6-201ENST00000334504 PI4KAP2A4QPH2 592 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 BEND3Q5T5X7 828 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 GPIHBP1Q8IV16 184 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 PI4KAP1Q8N8J0 262 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 GPTP24298 496 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 CCT5P48643 541 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 DBN1Q16643 649 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 DTHD1Q6ZMT9 781 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms