RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 IMPACTQ9P2X3 320 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 LIG3P49916 1009 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
CCDC87-201ENST00000333861 GSPT2Q8IYD1 628 aaKnown RBP12.76□□□□□ -0.37
CCDC87-201ENST00000333861 STAMQ92783 540 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
CCDC87-201ENST00000333861 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
CCDC87-201ENST00000333861 CTAGE5O15320 804 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 TOP1P11387 765 aaKnown RBP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 MAP3K9P80192 1104 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 HSP90AB4PQ58FF6 505 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 IP6K1Q92551 441 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 KCNB2Q92953 911 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 SPTLC2O15270 562 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 FBXW10Q5XX13 1052 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 SMYD4Q8IYR2 804 aaPredicted RBP12.75□□□□□ -0.37
CCDC87-201ENST00000333861 EHD4Q9H223 541 aa12.75□□□□□ -0.37
CCDC87-201ENST00000333861 NEDD4P46934 1319 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 E7EWF7 191 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 LINC00301Q8NCQ3 95 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 KCND1Q9NSA2 647 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
CCDC87-201ENST00000333861 CDC25AP30304 524 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
CCDC87-201ENST00000333861 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
CCDC87-201ENST00000333861 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 ANKZF1Q9H8Y5 726 aa12.74□□□□□ -0.37
CCDC87-201ENST00000333861 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
CCDC87-201ENST00000333861 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 TXLNAP40222 546 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 BANK1Q8NDB2 785 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 KAT2BQ92831 832 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 EEF2KMTQ96G04 330 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 KCNG1Q9UIX4 513 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 TEX33O43247 280 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 MNAT1P51948 309 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 FMR1Q06787 632 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC87-201ENST00000333861 BEND6Q5SZJ8 279 aaPredicted RBP12.73□□□□□ -0.37
CCDC87-201ENST00000333861 JAKMIP3Q5VZ66 844 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 ANKRD24Q8TF21 1146 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
CCDC87-201ENST00000333861 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 MED23Q9ULK4 1368 aa12.73□□□□□ -0.37
CCDC87-201ENST00000333861 M0R2C6 588 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 PFKFB2O60825 505 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 BMP6P22004 513 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 VSNL1P62760 191 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 ARHGEF10O15013 1369 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
CCDC87-201ENST00000333861 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 SYNE3Q6ZMZ3 975 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
CCDC87-201ENST00000333861 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 BAG1Q99933 345 aaPredicted RBP12.72□□□□□ -0.37
CCDC87-201ENST00000333861 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 TNS3Q68CZ2 1445 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
CCDC87-201ENST00000333861 MAP2K7O14733 419 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 IVLP07476 585 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 TPM1P09493 284 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 NLRP12P59046 1061 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 RABGGTAQ92696 567 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 TRIM10Q9UDY6 481 aa12.72□□□□□ -0.37
CCDC87-201ENST00000333861 KIF1AQ12756 1690 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 CORO7P57737 925 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 USP49Q70CQ1 688 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
CCDC87-201ENST00000333861 ENC1O14682 589 aa12.71□□□□□ -0.38
CCDC87-201ENST00000333861 CPLX1O14810 134 aa12.71□□□□□ -0.38
CCDC87-201ENST00000333861 ATP8B1O43520 1251 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms