RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 L1TD1Q5T7N2 865 aaKnown RBP13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 SERPINA10Q9UK55 444 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
APOBEC3B-201ENST00000333467 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 MTX1Q13505 466 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 DEFB129Q9H1M3 183 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 CRKP46108 304 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 PRKG1Q13976 671 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 RPAP2Q8IXW5 612 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 CEP126Q9P2H0 1117 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 PPP2R3BQ9Y5P8 575 aa13.44□□□□□ -0.26
APOBEC3B-201ENST00000333467 MYO5AQ9Y4I1 1855 aaKnown RBP13.43□□□□□ -0.26
APOBEC3B-201ENST00000333467 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
APOBEC3B-201ENST00000333467 CA12O43570 354 aa13.43□□□□□ -0.26
APOBEC3B-201ENST00000333467 GNAI2P04899 355 aa13.43□□□□□ -0.26
APOBEC3B-201ENST00000333467 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
APOBEC3B-201ENST00000333467 MAST3O60307 1309 aa13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 ZNF70Q9UC06 446 aaPredicted RBP13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
APOBEC3B-201ENST00000333467 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 ADORA1P30542 326 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 PHKA1P46020 1223 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 ARMC9Q7Z3E5 817 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 TEKT1Q969V4 418 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 SLKQ9H2G2 1235 aaPredicted RBP13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 ANGEL1Q9UNK9 670 aaKnown RBP13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
APOBEC3B-201ENST00000333467 CDC45O75419 566 aa13.4□□□□□ -0.26
APOBEC3B-201ENST00000333467 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
APOBEC3B-201ENST00000333467 RASA3Q14644 834 aa13.4□□□□□ -0.26
APOBEC3B-201ENST00000333467 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 TFCP2Q12800 502 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 PRDX5P30044 214 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 CACNB3P54284 484 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 ZDHHC15Q96MV8 337 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
APOBEC3B-201ENST00000333467 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 SEMA3EO15041 775 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 HMMRO75330 724 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 MCM4P33991 863 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 TNNI2P48788 182 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 LDLRAD1Q5T700 205 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 TEPSINQ96N21 525 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 DENND2AQ9ULE3 1009 aa13.38□□□□□ -0.27
APOBEC3B-201ENST00000333467 RPAP1Q9BWH6 1393 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 ATAD5Q96QE3 1844 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 DDIT3P35638 169 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 TIMM10P62072 90 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 APOBEC3HQ6NTF7 200 aaKnown RBP13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 XAGE2Q96GT9 111 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
APOBEC3B-201ENST00000333467 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
APOBEC3B-201ENST00000333467 TRPA1O75762 1119 aa13.36□□□□□ -0.27
APOBEC3B-201ENST00000333467 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
APOBEC3B-201ENST00000333467 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
APOBEC3B-201ENST00000333467 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
APOBEC3B-201ENST00000333467 ZBTB22O15209 634 aa13.35□□□□□ -0.27
APOBEC3B-201ENST00000333467 LDHBP07195 334 aaKnown RBP13.35□□□□□ -0.27
APOBEC3B-201ENST00000333467 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
APOBEC3B-201ENST00000333467 SPRYD7Q5W111 196 aa13.35□□□□□ -0.27
APOBEC3B-201ENST00000333467 TBC1D9Q6ZT07 1266 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms