RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 POLR3GO15318 223 aaPredicted RBP14.8□□□□□ -0.04
VSTM4-202ENST00000332853 FAM47AQ5JRC9 791 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 DTHD1Q6ZMT9 781 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 HAUS7Q99871 368 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 DEXIO95424 95 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 NEFHP12036 1026 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 DSCC1Q9BVC3 393 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 ADCK5Q3MIX3 580 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 JADE2Q9NQC1 790 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 V9GYY5 206 aaPredicted RBP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 CCDC66A2RUB6 948 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 NOP2P46087 812 aaKnown RBP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 UIMC1Q96RL1 719 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 ELP1O95163 1332 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 CGNQ9P2M7 1197 aaKnown RBP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 ARAP3Q8WWN8 1544 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 TMCO5BA8MYB1 307 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 TMEM63CQ9P1W3 806 aa14.79□□□□□ -0.04
VSTM4-202ENST00000332853 DBNLQ9UJU6 430 aaKnown RBP14.79□□□□□ -0.04
VSTM4-202ENST00000332853 KCNQ4P56696 695 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 ZBTB9Q96C00 473 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 DRC1Q96MC2 740 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 LSG1Q9H089 658 aaKnown RBP14.78□□□□□ -0.04
VSTM4-202ENST00000332853 BRD1O95696 1058 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
VSTM4-202ENST00000332853 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 ERMNQ8TAM6 284 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 PSMA7O14818 248 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 MAPKAPK5Q8IW41 473 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 DIS3L2Q8IYB7 885 aaKnown RBP14.78□□□□□ -0.04
VSTM4-202ENST00000332853 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.78□□□□□ -0.04
VSTM4-202ENST00000332853 ERBB3P21860 1342 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 LRRC27Q9C0I9 530 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 TGFBRAP1Q8WUH2 860 aa14.78□□□□□ -0.04
VSTM4-202ENST00000332853 GTF3C6Q969F1 213 aa14.77□□□□□ -0.04
VSTM4-202ENST00000332853 POLR2DO15514 142 aaKnown RBP14.77□□□□□ -0.04
VSTM4-202ENST00000332853 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.04
VSTM4-202ENST00000332853 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.04
VSTM4-202ENST00000332853 CLSTN2Q9H4D0 955 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 SPDYE3A6NKU9 549 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 ARID5AQ03989 594 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 KRT40Q6A162 431 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 MAPK8IP1Q9UQF2 711 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 PAXBP1Q9Y5B6 917 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 MAP3K15Q6ZN16 1313 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 PAFAH1B1P43034 410 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 UBXN1Q04323 297 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
VSTM4-202ENST00000332853 ALS2CR12Q96Q35 445 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
VSTM4-202ENST00000332853 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 GNA11P29992 359 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 PRPF4BQ13523 1007 aaKnown RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 KRT79Q5XKE5 535 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 CTNND2Q9UQB3 1225 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 AKR1B10O60218 316 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 EYA3Q99504 573 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 GOPCQ9HD26 462 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 STAP2Q9UGK3 403 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 PCCAP05165 728 aaPredicted RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 KCNH3Q9ULD8 1083 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 CCNT1O60563 726 aaKnown RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 CCT6AP40227 531 aaKnown RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 BICD1Q96G01 975 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 TM6SF1Q9BZW5 370 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
VSTM4-202ENST00000332853 C17orf53Q8N3J3 647 aaPredicted RBP14.76□□□□□ -0.05
VSTM4-202ENST00000332853 GOLGA6L9A6NEM1 432 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 GBP3Q9H0R5 595 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 VPS54Q9P1Q0 977 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PHKA1P46020 1223 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PPARAQ07869 468 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 TCP10Q12799 353 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PLS1Q14651 629 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 DHX37Q8IY37 1157 aaKnown RBP14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PPRC1Q5VV67 1664 aaKnown RBP14.75□□□□□ -0.05
VSTM4-202ENST00000332853 MACROD2A1Z1Q3 448 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 CRKLP46109 303 aaKnown RBP14.75□□□□□ -0.05
VSTM4-202ENST00000332853 SEPT7Q16181 437 aaKnown RBP14.75□□□□□ -0.05
VSTM4-202ENST00000332853 TTC6Q86TZ1 520 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 CTNNBL1Q8WYA6 563 aaPredicted RBP14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PRIMPOLQ96LW4 560 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 RILPL1Q5EBL4 403 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 IQUBQ8NA54 791 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 CDC42BPGQ6DT37 1551 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms