RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.95■□□□□ 0.78
C11orf88-201ENST00000332814 NSUN4Q96CB9 384 aaKnown RBP19.95■□□□□ 0.78
C11orf88-201ENST00000332814 PAPPA2Q9BXP8 1791 aa19.94■□□□□ 0.78
C11orf88-201ENST00000332814 MAP3K12Q12852 859 aa19.94■□□□□ 0.78
C11orf88-201ENST00000332814 CDC42EP5Q6NZY7 148 aa19.94■□□□□ 0.78
C11orf88-201ENST00000332814 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
C11orf88-201ENST00000332814 HHIPL1Q96JK4 782 aa19.94■□□□□ 0.78
C11orf88-201ENST00000332814 MAST2Q6P0Q8 1798 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 PPP1R12BO60237 982 aaPredicted RBP19.93■□□□□ 0.78
C11orf88-201ENST00000332814 PRKG1Q13976 671 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 FKBP1CQ5VVH2 108 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 FAM83AQ86UY5 434 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 HOOK2Q96ED9 719 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 FAM163AQ96GL9 167 aaPredicted RBP19.93■□□□□ 0.78
C11orf88-201ENST00000332814 CAPNS2Q96L46 248 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 PIH1D3Q9NQM4 214 aaKnown RBP19.93■□□□□ 0.78
C11orf88-201ENST00000332814 ECHDC1Q9NTX5 307 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 NDUFB9Q9Y6M9 179 aa19.93■□□□□ 0.78
C11orf88-201ENST00000332814 POLR2AP24928 1970 aaKnown RBP19.93■□□□□ 0.78
C11orf88-201ENST00000332814 BAG3O95817 575 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 ATP5JP18859 108 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 VEGFBP49765 207 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 TMEM39BQ9GZU3 492 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 BOLA2Q9H3K6 86 aa19.92■□□□□ 0.78
C11orf88-201ENST00000332814 GPR75-ASB3A0A0A6YYF3 556 aa19.91■□□□□ 0.78
C11orf88-201ENST00000332814 GOLIM4O00461 696 aa19.91■□□□□ 0.78
C11orf88-201ENST00000332814 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
C11orf88-201ENST00000332814 RGMBQ6NW40 437 aa19.91■□□□□ 0.78
C11orf88-201ENST00000332814 ANTXR1Q9H6X2 564 aa19.91■□□□□ 0.78
C11orf88-201ENST00000332814 ANGEL1Q9UNK9 670 aaKnown RBP19.91■□□□□ 0.78
C11orf88-201ENST00000332814 WDR33Q9C0J8 1336 aaKnown RBP19.91■□□□□ 0.78
C11orf88-201ENST00000332814 MAP4K4O95819 1239 aaPredicted RBP19.9■□□□□ 0.78
C11orf88-201ENST00000332814 PLCG2P16885 1265 aa19.9■□□□□ 0.78
C11orf88-201ENST00000332814 CYP7A1P22680 504 aa19.9■□□□□ 0.78
C11orf88-201ENST00000332814 ZNF157P51786 506 aaPredicted RBP19.9■□□□□ 0.78
C11orf88-201ENST00000332814 TCP10Q12799 353 aa19.9■□□□□ 0.78
C11orf88-201ENST00000332814 TMED8Q6PL24 325 aaPredicted RBP19.9■□□□□ 0.78
C11orf88-201ENST00000332814 PAG1Q9NWQ8 432 aa19.9■□□□□ 0.78
C11orf88-201ENST00000332814 RPAP1Q9BWH6 1393 aaPredicted RBP19.9■□□□□ 0.78
C11orf88-201ENST00000332814 UBE2Q2LH0YL09 131 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 IREB2P48200 963 aaKnown RBP19.89■□□□□ 0.77
C11orf88-201ENST00000332814 MOB2Q70IA6 237 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 MAGEB6Q8N7X4 407 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 FAM151AQ8WW52 585 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 CCDC102AQ96A19 550 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.89■□□□□ 0.77
C11orf88-201ENST00000332814 AATFQ9NY61 560 aaKnown RBP eCLIP19.89■□□□□ 0.77
C11orf88-201ENST00000332814 AKAP11Q9UKA4 1901 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 MYH2Q9UKX2 1941 aa19.89■□□□□ 0.77
C11orf88-201ENST00000332814 ERC2O15083 957 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 RGS3P49796 1198 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 NFIAQ12857 509 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 PICALMQ13492 652 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 ZSCAN29Q8IWY8 852 aaPredicted RBP19.88■□□□□ 0.77
C11orf88-201ENST00000332814 JMYQ8N9B5 988 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 ZNF384Q8TF68 577 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 HAUS7Q99871 368 aa19.88■□□□□ 0.77
C11orf88-201ENST00000332814 TTC41PQ6P2S7 1318 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 ENTPD3O75355 529 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 DCAF15Q66K64 600 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 CERS3Q8IU89 383 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 TEX11Q8IYF3 940 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.87■□□□□ 0.77
C11orf88-201ENST00000332814 SSC5DA1L4H1 1573 aa19.87■□□□□ 0.77
C11orf88-201ENST00000332814 MX1P20591 662 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 NOGQ13253 232 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 SLC9C2Q5TAH2 1124 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 FZD1Q9UP38 647 aa19.86■□□□□ 0.77
C11orf88-201ENST00000332814 RHBDL3P58872 404 aa19.85■□□□□ 0.77
C11orf88-201ENST00000332814 TSHZ3Q63HK5 1081 aa19.85■□□□□ 0.77
C11orf88-201ENST00000332814 CDAN1Q8IWY9 1227 aa19.85■□□□□ 0.77
C11orf88-201ENST00000332814 SMC5Q8IY18 1101 aa19.85■□□□□ 0.77
C11orf88-201ENST00000332814 EDC3Q96F86 508 aaKnown RBP19.85■□□□□ 0.77
C11orf88-201ENST00000332814 WDHD1O75717 1129 aaPredicted RBP19.84■□□□□ 0.77
C11orf88-201ENST00000332814 IGHDP01880 384 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 SLC10A3P09131 477 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 PDE6AP16499 860 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 MAP3K11Q16584 847 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 ADGRA1Q86SQ6 560 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 ANKRD13AQ8IZ07 590 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 MIGA1Q8NAN2 632 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 SH3RF3Q8TEJ3 882 aaPredicted RBP19.84■□□□□ 0.77
C11orf88-201ENST00000332814 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 BEGAINQ9BUH8 593 aa19.84■□□□□ 0.77
C11orf88-201ENST00000332814 RFX7Q2KHR2 1363 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 AOC2O75106 756 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 GLRX3O76003 335 aaKnown RBP19.83■□□□□ 0.77
C11orf88-201ENST00000332814 CENPBP07199 599 aaPredicted RBP19.83■□□□□ 0.77
C11orf88-201ENST00000332814 MAP2K2P36507 400 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 PPP4CP60510 307 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 RASAL3Q86YV0 1011 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 AIDAQ96BJ3 306 aa19.83■□□□□ 0.77
C11orf88-201ENST00000332814 LNPKQ9C0E8 428 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms