RNA–Protein interactions for RNA: ENST00000331587.8

CALCA-201, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-201ENST00000331587 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
CALCA-201ENST00000331587 LDLRAD1Q5T700 205 aa18.05■□□□□ 0.48
CALCA-201ENST00000331587 DZIP1Q86YF9 867 aaKnown RBP18.05■□□□□ 0.48
CALCA-201ENST00000331587 NSUN4Q96CB9 384 aaKnown RBP18.05■□□□□ 0.48
CALCA-201ENST00000331587 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
CALCA-201ENST00000331587 FAM198AQ9UFP1 575 aa18.05■□□□□ 0.48
CALCA-201ENST00000331587 TSKSQ9UJT2 592 aa18.05■□□□□ 0.48
CALCA-201ENST00000331587 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
CALCA-201ENST00000331587 HMMRO75330 724 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 NF2P35240 595 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 KIF23Q02241 960 aaPredicted RBP18.04■□□□□ 0.48
CALCA-201ENST00000331587 MKRN3Q13064 507 aaKnown RBP18.04■□□□□ 0.48
CALCA-201ENST00000331587 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 ERC1Q8IUD2 1116 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
CALCA-201ENST00000331587 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 MAP2K2P36507 400 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 BTDP43251 543 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 TCP10Q12799 353 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
CALCA-201ENST00000331587 ADGRA1Q86SQ6 560 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 ZGPATQ8N5A5 531 aaKnown RBP18.03■□□□□ 0.48
CALCA-201ENST00000331587 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
CALCA-201ENST00000331587 ZNF512BQ96KM6 892 aaPredicted RBP18.03■□□□□ 0.48
CALCA-201ENST00000331587 CHMP4BQ9H444 224 aaKnown RBP18.03■□□□□ 0.48
CALCA-201ENST00000331587 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
CALCA-201ENST00000331587 HSPA8P11142 646 aaKnown RBP18.02■□□□□ 0.48
CALCA-201ENST00000331587 RHBDL3P58872 404 aa18.02■□□□□ 0.48
CALCA-201ENST00000331587 NOGQ13253 232 aa18.02■□□□□ 0.48
CALCA-201ENST00000331587 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
CALCA-201ENST00000331587 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
CALCA-201ENST00000331587 FAM163AQ96GL9 167 aaPredicted RBP18.02■□□□□ 0.48
CALCA-201ENST00000331587 RAI14Q9P0K7 980 aa18.02■□□□□ 0.48
CALCA-201ENST00000331587 LAMB1P07942 1786 aa18.02■□□□□ 0.47
CALCA-201ENST00000331587 GJA5P36382 358 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 SUPT20HL1Q3ZLR7 823 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 FKBP1CQ5VVH2 108 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 SPTY2D1Q68D10 685 aaPredicted RBP18.01■□□□□ 0.47
CALCA-201ENST00000331587 SH3BP5LQ7L8J4 393 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 FAM83AQ86UY5 434 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 CCDC102AQ96A19 550 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
CALCA-201ENST00000331587 GPR75-ASB3A0A0A6YYF3 556 aa18■□□□□ 0.47
CALCA-201ENST00000331587 RAB11FIP3O75154 756 aa18■□□□□ 0.47
CALCA-201ENST00000331587 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
CALCA-201ENST00000331587 TNNI2P48788 182 aa18■□□□□ 0.47
CALCA-201ENST00000331587 RGS3P49796 1198 aa18■□□□□ 0.47
CALCA-201ENST00000331587 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
CALCA-201ENST00000331587 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
CALCA-201ENST00000331587 EDC3Q96F86 508 aaKnown RBP18■□□□□ 0.47
CALCA-201ENST00000331587 TMOD2Q9NZR1 351 aa18■□□□□ 0.47
CALCA-201ENST00000331587 LRP2BPQ9P2M1 347 aa18■□□□□ 0.47
CALCA-201ENST00000331587 AK9Q5TCS8 1911 aa18■□□□□ 0.47
CALCA-201ENST00000331587 LBX1P52954 281 aa17.99■□□□□ 0.47
CALCA-201ENST00000331587 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.99■□□□□ 0.47
CALCA-201ENST00000331587 MIGA2Q7L4E1 593 aa17.99■□□□□ 0.47
CALCA-201ENST00000331587 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
CALCA-201ENST00000331587 FAM151AQ8WW52 585 aa17.99■□□□□ 0.47
CALCA-201ENST00000331587 DCTPP1Q9H773 170 aa17.99■□□□□ 0.47
CALCA-201ENST00000331587 ATRNL1Q5VV63 1379 aa17.99■□□□□ 0.47
CALCA-201ENST00000331587 RPAP1Q9BWH6 1393 aaPredicted RBP17.99■□□□□ 0.47
CALCA-201ENST00000331587 SIPA1L1O43166 1804 aa17.98■□□□□ 0.47
CALCA-201ENST00000331587 FOCADQ5VW36 1801 aa17.98■□□□□ 0.47
CALCA-201ENST00000331587 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
CALCA-201ENST00000331587 IDI2Q9BXS1 227 aa17.98■□□□□ 0.47
CALCA-201ENST00000331587 DDTLA6NHG4 134 aaPredicted RBP17.97■□□□□ 0.47
CALCA-201ENST00000331587 IFIT2P09913 472 aaKnown RBP17.97■□□□□ 0.47
CALCA-201ENST00000331587 PICALMQ13492 652 aa17.97■□□□□ 0.47
CALCA-201ENST00000331587 SPRYD7Q5W111 196 aa17.97■□□□□ 0.47
CALCA-201ENST00000331587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.97■□□□□ 0.47
CALCA-201ENST00000331587 SH3RF3Q8TEJ3 882 aaPredicted RBP17.97■□□□□ 0.47
CALCA-201ENST00000331587 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
CALCA-201ENST00000331587 WNK4Q96J92 1243 aa17.97■□□□□ 0.47
CALCA-201ENST00000331587 ELP3Q9H9T3 547 aa17.97■□□□□ 0.47
CALCA-201ENST00000331587 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
CALCA-201ENST00000331587 CTCFP49711 727 aaPredicted RBP17.96■□□□□ 0.47
CALCA-201ENST00000331587 DYNLL1P63167 89 aaKnown RBP17.96■□□□□ 0.47
CALCA-201ENST00000331587 VGLL4Q14135 290 aa17.96■□□□□ 0.47
CALCA-201ENST00000331587 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
CALCA-201ENST00000331587 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
CALCA-201ENST00000331587 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
CALCA-201ENST00000331587 ZKSCAN4Q969J2 545 aaPredicted RBP17.96■□□□□ 0.47
CALCA-201ENST00000331587 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
CALCA-201ENST00000331587 AATFQ9NY61 560 aaKnown RBP eCLIP17.96■□□□□ 0.47
CALCA-201ENST00000331587 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
CALCA-201ENST00000331587 CHGBP05060 677 aa17.95■□□□□ 0.46
CALCA-201ENST00000331587 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
CALCA-201ENST00000331587 SLC10A4Q96EP9 437 aa17.95■□□□□ 0.46
CALCA-201ENST00000331587 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
CALCA-201ENST00000331587 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
CALCA-201ENST00000331587 SNCAIPQ9Y6H5 919 aa17.95■□□□□ 0.46
CALCA-201ENST00000331587 ENTPD3O75355 529 aa17.94■□□□□ 0.46
CALCA-201ENST00000331587 LDHCP07864 332 aa17.94■□□□□ 0.46
CALCA-201ENST00000331587 INPP5BP32019 993 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms