RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 SALL1Q9NSC2 1324 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 C6orf229H3BNL8 230 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 SPTY2D1Q68D10 685 aaPredicted RBP23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 DEFB132Q7Z7B7 95 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 MASTLQ96GX5 879 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 LMBRD1Q9NUN5 540 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 TACC3Q9Y6A5 838 aa23.9■■□□□ 1.42
RIPPLY3-201ENST00000329553 LRRC37AA6NMS7 1700 aa23.89■■□□□ 1.42
RIPPLY3-201ENST00000329553 IL1R1P14778 569 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 EVCP57679 992 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 OLFM4Q6UX06 510 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 CYB5R4Q7L1T6 521 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 ZNF274Q96GC6 653 aaPredicted RBP23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 NEDD4P46934 1319 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 B4E1Z4 1266 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 PDIA3P30101 505 aaKnown RBP23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 CLCN1P35523 988 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 SF3B2Q13435 895 aaKnown RBP23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 WDR19Q8NEZ3 1342 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 LTBP1Q14766 1721 aa23.88■■□□□ 1.41
RIPPLY3-201ENST00000329553 CCDC88AQ3V6T2 1871 aa23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 ZSCAN22P10073 491 aaPredicted RBP23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 COL11A2P13942 1736 aaPredicted RBP23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 LDHBP07195 334 aaKnown RBP23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 BAG6P46379 1132 aa23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 GRIK5Q16478 980 aa23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 DZIP1Q86YF9 867 aaKnown RBP23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 AATFQ9NY61 560 aaKnown RBP eCLIP23.87■■□□□ 1.41
RIPPLY3-201ENST00000329553 JAK2O60674 1132 aa23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 CCT2P78371 535 aaKnown RBP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 AKNAD1Q5T1N1 836 aa23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 ZNF622Q969S3 477 aaKnown RBP eCLIP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 LARP1BQ659C4 914 aaKnown RBP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 TMED8Q6PL24 325 aaPredicted RBP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 C2CD5Q86YS7 1000 aa23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 PDGFDQ9GZP0 370 aaPredicted RBP23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 MTMR6Q9Y217 621 aa23.86■■□□□ 1.41
RIPPLY3-201ENST00000329553 ZNF445P59923 1031 aa23.85■■□□□ 1.41
RIPPLY3-201ENST00000329553 MFSD6Q6ZSS7 791 aa23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 MPNDQ8N594 471 aa23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 NCOA5Q9HCD5 579 aaKnown RBP23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 PPARAQ07869 468 aa23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 FOXD4L6Q3SYB3 417 aaPredicted RBP23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 FOXD4L3Q6VB84 417 aaPredicted RBP23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 STAG1Q8WVM7 1258 aa23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 CHD4Q14839 1912 aa23.84■■□□□ 1.41
RIPPLY3-201ENST00000329553 MINDY4BA8MYZ0 360 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 RIMBP2O15034 1052 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 IGSF3O75054 1194 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 CTDNEP1O95476 244 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 STK11IPQ8N1F8 1099 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 LLPHQ9BRT6 129 aaKnown RBP23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 ZSWIM5Q9P217 1185 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 QSER1Q2KHR3 1735 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 MAST2Q6P0Q8 1798 aa23.83■■□□□ 1.41
RIPPLY3-201ENST00000329553 H0YIN7 160 aa23.83■■□□□ 1.4
RIPPLY3-201ENST00000329553 SMIM22K7EJ46 135 aa23.83■■□□□ 1.4
RIPPLY3-201ENST00000329553 F13A1P00488 732 aa23.83■■□□□ 1.4
RIPPLY3-201ENST00000329553 SMARCC2Q8TAQ2 1214 aa23.83■■□□□ 1.4
RIPPLY3-201ENST00000329553 CNNM2Q9H8M5 875 aa23.83■■□□□ 1.4
RIPPLY3-201ENST00000329553 KLF18A0A0U1RQI7 1052 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 NSUN7Q8NE18 718 aaKnown RBP23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 ANAPC4Q9UJX5 808 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 BAZ2AQ9UIF9 1905 aaKnown RBP23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 KDM4AO75164 1064 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 PDCP20941 246 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 GIMAP6Q6P9H5 292 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 DPP8Q6V1X1 898 aaPredicted RBP23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 IGDCC4Q8TDY8 1250 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 CRNKL1Q9BZJ0 848 aaKnown RBP23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 KRT23Q9C075 422 aa23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 ANGEL1Q9UNK9 670 aaKnown RBP23.82■■□□□ 1.4
RIPPLY3-201ENST00000329553 VPS37CA5D8V6 355 aaPredicted RBP23.81■■□□□ 1.4
RIPPLY3-201ENST00000329553 SH2B2O14492 632 aaPredicted RBP23.81■■□□□ 1.4
RIPPLY3-201ENST00000329553 PRPF40AO75400 957 aaKnown RBP23.81■■□□□ 1.4
RIPPLY3-201ENST00000329553 DIXDC1Q155Q3 683 aa23.81■■□□□ 1.4
RIPPLY3-201ENST00000329553 TMEM87BQ96K49 555 aa23.81■■□□□ 1.4
RIPPLY3-201ENST00000329553 RRP12Q5JTH9 1297 aaKnown RBP23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 STYK1Q6J9G0 422 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 HPS5Q9UPZ3 1129 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 CYP2D7A0A087X1C5 515 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 PDIA4P13667 645 aaKnown RBP23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 CHRNA5P30532 468 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 SENP2Q9HC62 589 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 DCP1AQ9NPI6 582 aaPredicted RBP23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 TOMM22Q9NS69 142 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 DUOX1Q9NRD9 1551 aa23.8■■□□□ 1.4
RIPPLY3-201ENST00000329553 ESPNB1AK53 854 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 NASPP49321 788 aaPredicted RBP23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 GSTO1P78417 241 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 ZSCAN23Q3MJ62 389 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 COA1Q9GZY4 146 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 TMX4Q9H1E5 349 aaPredicted RBP23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 RNF41Q9H4P4 317 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms