RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CPLX3Q8WVH0 158 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 RTEL1Q9NZ71 1219 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 PFDN6O15212 129 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 CHMP4BP1P59074 171 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 WTAPQ15007 396 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 HAUS1Q96CS2 278 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 NOC2LQ9Y3T9 749 aaKnown RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 SMARCA5O60264 1052 aaPredicted RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 KRBA2Q6ZNG9 492 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 TRERF1Q96PN7 1200 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 KAT14Q9H8E8 782 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 C20orf194Q5TEA3 1177 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 CCDC186Q7Z3E2 898 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 PPP1R42Q7Z4L9 355 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 RAB17Q9H0T7 212 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 TRPM2O94759 1503 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 INPP5BP32019 993 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 GRIN2AQ12879 1464 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 REREQ9P2R6 1566 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 BAG1Q99933 345 aaPredicted RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 H0YCG3 227 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 SPTLC2O15270 562 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 INTS8Q75QN2 995 aaKnown RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 YWHAEP62258 255 aaKnown RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 NBPF6Q5VWK0 638 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 PHLDB3Q6NSJ2 640 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 CYP26C1Q6V0L0 522 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 GOLGA5Q8TBA6 731 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 NBPF4Q96M43 638 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 PPFIA4O75335 1185 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 APLFQ8IW19 511 aaPredicted RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 NOX5Q96PH1 765 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 ABCF2Q9UG63 623 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 EIF4G3O43432 1585 aaKnown RBP7.08□□□□□ -1.28
SSH1-202ENST00000326495 UBXN1Q04323 297 aa7.08□□□□□ -1.28
SSH1-202ENST00000326495 GOLGA8CPA6NN73 597 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 NAA25Q14CX7 972 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 INF2Q27J81 1249 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 KIRREL3Q8IZU9 778 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 SLC26A6Q9BXS9 759 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 DONSONQ9NYP3 566 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 COMMD10Q9Y6G5 202 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 KIF20BQ96Q89 1820 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 MSH6P52701 1360 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 DNA2P51530 1060 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 RRS1Q15050 365 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 RRAGBQ5VZM2 374 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 HAUS3Q68CZ6 603 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 POLR3AO14802 1390 aaPredicted RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 CLASP1Q7Z460 1538 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 MICU3Q86XE3 530 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 AOPEPQ8N6M6 819 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 TUBB6Q9BUF5 446 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 NUF2Q9BZD4 464 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 TYW1Q9NV66 732 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 IFIT1BQ5T764 474 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 RNF14Q9UBS8 474 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 F8W8V4 182 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 TCERG1LQ5VWI1 586 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 ZSWIM4Q9H7M6 989 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 GFM2Q969S9 779 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 CACYBPQ9HB71 228 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 NAPGQ99747 312 aaPredicted RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 MYL1P05976 194 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 SEL1L2Q5TEA6 688 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 CNNM4Q6P4Q7 775 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 DACT1Q9NYF0 836 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 GSTA5Q7RTV2 222 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 TFIP11Q9UBB9 837 aaKnown RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 IGSF3O75054 1194 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 ALG1Q9BT22 464 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
SSH1-202ENST00000326495 SOS2Q07890 1332 aaPredicted RBP7.07□□□□□ -1.28
SSH1-202ENST00000326495 BRD3Q15059 726 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 CCDC117Q8IWD4 279 aaPredicted RBP7.06□□□□□ -1.28
SSH1-202ENST00000326495 CCDC124Q96CT7 223 aaKnown RBP7.06□□□□□ -1.28
SSH1-202ENST00000326495 KDM5BQ9UGL1 1544 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 ZPR1O75312 459 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 CCHCR1Q8TD31 782 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 TRIM75PA6NK02 468 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 FLOT1O75955 427 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 EP400NLQ6ZTU2 488 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 CABP5Q9NP86 173 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 PLB1Q6P1J6 1458 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 NDUFAB1O14561 156 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 KRT2P35908 639 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 KIF2CQ99661 725 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 ZNF277Q9NRM2 450 aaPredicted RBP7.06□□□□□ -1.28
SSH1-202ENST00000326495 ZEB2O60315 1214 aa7.06□□□□□ -1.28
SSH1-202ENST00000326495 GUCY1B3Q02153 619 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms