RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 H7C1W4 665 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 IFIT5Q13325 482 aaKnown RBP13.9□□□□□ -0.18
NLRC3-201ENST00000324659 TEX35Q5T0J7 233 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
NLRC3-201ENST00000324659 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 INCENPQ9NQS7 918 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 A0A1W2PQ27 194 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 A0A1W2PQ64 194 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 A0A1W2PQD8 194 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 FOXP2O15409 715 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 DHX16O60231 1041 aaKnown RBP13.9□□□□□ -0.18
NLRC3-201ENST00000324659 ATP2B1P20020 1258 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
NLRC3-201ENST00000324659 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 SENP2Q9HC62 589 aa13.9□□□□□ -0.18
NLRC3-201ENST00000324659 IQSEC3Q9UPP2 1182 aaPredicted RBP13.9□□□□□ -0.18
NLRC3-201ENST00000324659 NCAPHQ15003 741 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 POLR3EQ9NVU0 708 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 NEDD4P46934 1319 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 EXOC5O00471 708 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 GPAA1O43292 621 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 NFXL1Q6ZNB6 911 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 ZCCHC17Q9NP64 241 aaKnown RBP13.89□□□□□ -0.19
NLRC3-201ENST00000324659 WDR17Q8IZU2 1322 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 YEATS4O95619 227 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 KCNQ4P56696 695 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 AXDND1Q5T1B0 1012 aaPredicted RBP13.89□□□□□ -0.19
NLRC3-201ENST00000324659 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 MNS1Q8NEH6 495 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 IMPACTQ9P2X3 320 aa13.89□□□□□ -0.19
NLRC3-201ENST00000324659 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 TRIM66O15016 1216 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 TRDNQ13061 729 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 SNAP23O00161 211 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 FOXN1O15353 648 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
NLRC3-201ENST00000324659 CLCN6P51797 869 aa13.88□□□□□ -0.19
NLRC3-201ENST00000324659 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
NLRC3-201ENST00000324659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
NLRC3-201ENST00000324659 B4E1Z4 1266 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 FANCLQ9NW38 375 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
NLRC3-201ENST00000324659 MYH15Q9Y2K3 1946 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
NLRC3-201ENST00000324659 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 BRAPQ7Z569 592 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 UBXN4Q92575 508 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 SEC31AO94979 1220 aaKnown RBP13.87□□□□□ -0.19
NLRC3-201ENST00000324659 GYS2P54840 703 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 KRT40Q6A162 431 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 PIGBQ92521 554 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
NLRC3-201ENST00000324659 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CMA1P23946 247 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CYP2C19P33261 490 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 SHC4Q6S5L8 630 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 TSPYL1Q9H0U9 437 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
NLRC3-201ENST00000324659 RRP12Q5JTH9 1297 aaKnown RBP13.86□□□□□ -0.19
NLRC3-201ENST00000324659 SLC9C2Q5TAH2 1124 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CYB5R4Q7L1T6 521 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 TULP2O00295 520 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 CDC27P30260 824 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
NLRC3-201ENST00000324659 ETF1P62495 437 aaKnown RBP13.85□□□□□ -0.19
NLRC3-201ENST00000324659 MYL5Q02045 173 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 SLC39A14Q15043 492 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 HLFQ16534 295 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 LONRF3Q496Y0 759 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
NLRC3-201ENST00000324659 APPBP2Q92624 585 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 HSD3B7Q9H2F3 369 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 SKIDA1Q1XH10 827 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 TMCO3Q6UWJ1 677 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
NLRC3-201ENST00000324659 ADKP55263 362 aaKnown RBP13.84□□□□□ -0.19
NLRC3-201ENST00000324659 ST5P78524 1137 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
NLRC3-201ENST00000324659 FANCGO15287 622 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
NLRC3-201ENST00000324659 PDE4BQ07343 736 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 TRIM29Q14134 588 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 CCDC24Q8N4L8 307 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 DESI2Q9BSY9 194 aa13.84□□□□□ -0.19
NLRC3-201ENST00000324659 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms