RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 UBASH3AP57075 661 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 CTDSPL2Q05D32 466 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 RRP12Q5JTH9 1297 aaKnown RBP22.95■■□□□ 1.26
CRLF3-201ENST00000324238 TOMM22Q9NS69 142 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 FANCLQ9NW38 375 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 ZNF446Q9NWS9 450 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 WWC3Q9ULE0 1092 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 EVCP57679 992 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 GRAMD1CQ8IYS0 662 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 SLAIN2Q9P270 581 aa22.95■■□□□ 1.26
CRLF3-201ENST00000324238 TRMT112Q9UI30 125 aaKnown RBP22.95■■□□□ 1.26
CRLF3-201ENST00000324238 CMA1P23946 247 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 ZNF397Q8NF99 534 aaPredicted RBP22.94■■□□□ 1.26
CRLF3-201ENST00000324238 PDE4BQ07343 736 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 SLC39A14Q15043 492 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 PDILTQ8N807 584 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 KCNJ14Q9UNX9 436 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 CAMTA1Q9Y6Y1 1673 aa22.94■■□□□ 1.26
CRLF3-201ENST00000324238 CIAO1O76071 339 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 GUCY1A2P33402 732 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 ISCA1Q9BUE6 129 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 SLC26A6Q9BXS9 759 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
CRLF3-201ENST00000324238 FANCGO15287 622 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 PHKA1P46020 1223 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 BRAPQ7Z569 592 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 ERO1AQ96HE7 468 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 ANGEL1Q9UNK9 670 aaKnown RBP22.93■■□□□ 1.26
CRLF3-201ENST00000324238 ZNF532Q9HCE3 1301 aa22.93■■□□□ 1.26
CRLF3-201ENST00000324238 RANBP6O60518 1105 aaKnown RBP22.92■■□□□ 1.26
CRLF3-201ENST00000324238 TRMT44Q8IYL2 757 aaKnown RBP22.92■■□□□ 1.26
CRLF3-201ENST00000324238 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
CRLF3-201ENST00000324238 SYCP1Q15431 976 aa22.92■■□□□ 1.26
CRLF3-201ENST00000324238 APOA5Q6Q788 366 aa22.92■■□□□ 1.26
CRLF3-201ENST00000324238 ZBTB1Q9Y2K1 713 aa22.92■■□□□ 1.26
CRLF3-201ENST00000324238 PCDHA5Q9Y5H7 936 aa22.92■■□□□ 1.26
CRLF3-201ENST00000324238 ADAMTS7Q9UKP4 1686 aa22.91■■□□□ 1.26
CRLF3-201ENST00000324238 ERICH4A6NGS2 130 aa22.91■■□□□ 1.26
CRLF3-201ENST00000324238 METTL16Q86W50 562 aaKnown RBP22.91■■□□□ 1.26
CRLF3-201ENST00000324238 ATG3Q9NT62 314 aa22.91■■□□□ 1.26
CRLF3-201ENST00000324238 ZNF335Q9H4Z2 1342 aaPredicted RBP22.9■■□□□ 1.26
CRLF3-201ENST00000324238 BTBD18B2RXH4 712 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 BMP6P22004 513 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 TPM4P67936 248 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 IRS4O14654 1257 aaPredicted RBP22.9■■□□□ 1.26
CRLF3-201ENST00000324238 URI1O94763 535 aaPredicted RBP22.9■■□□□ 1.26
CRLF3-201ENST00000324238 TACC3Q9Y6A5 838 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 MORC2Q9Y6X9 1032 aaPredicted RBP22.9■■□□□ 1.26
CRLF3-201ENST00000324238 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 MYH15Q9Y2K3 1946 aa22.9■■□□□ 1.26
CRLF3-201ENST00000324238 ALS2Q96Q42 1657 aa22.89■■□□□ 1.26
CRLF3-201ENST00000324238 ZFYP08048 801 aaPredicted RBP22.89■■□□□ 1.26
CRLF3-201ENST00000324238 ARHGAP29Q52LW3 1261 aa22.89■■□□□ 1.26
CRLF3-201ENST00000324238 TMEM67Q5HYA8 995 aa22.89■■□□□ 1.26
CRLF3-201ENST00000324238 TTLL11Q8NHH1 800 aa22.89■■□□□ 1.26
CRLF3-201ENST00000324238 IMPACTQ9P2X3 320 aa22.89■■□□□ 1.26
CRLF3-201ENST00000324238 GOLGA8AA7E2F4 631 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 PRKAB2O43741 272 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 IARSP41252 1262 aaKnown RBP22.89■■□□□ 1.25
CRLF3-201ENST00000324238 PTPAQ15257 358 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 CCDC150Q8NCX0 1101 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 CNNM3Q8NE01 707 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 SLC4A9Q96Q91 983 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 SMIM22K7EJ46 135 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 SH2B2O14492 632 aaPredicted RBP22.89■■□□□ 1.25
CRLF3-201ENST00000324238 ADD2P35612 726 aa22.89■■□□□ 1.25
CRLF3-201ENST00000324238 hCG_1642624A0A1W2PR95 340 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 ZBTB43O43298 467 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 STARD3NLO95772 234 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 SLFN14P0C7P3 912 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 ADKP55263 362 aaKnown RBP22.88■■□□□ 1.25
CRLF3-201ENST00000324238 ZBTB38Q8NAP3 1195 aaPredicted RBP22.88■■□□□ 1.25
CRLF3-201ENST00000324238 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 LRRFIP1Q32MZ4 808 aaKnown RBP22.88■■□□□ 1.25
CRLF3-201ENST00000324238 KRT222Q8N1A0 295 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 FAM217BQ9NTX9 383 aaPredicted RBP22.88■■□□□ 1.25
CRLF3-201ENST00000324238 ZMYM6O95789 1325 aa22.88■■□□□ 1.25
CRLF3-201ENST00000324238 ABCC6O95255 1503 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 PRR29P0C7W0 189 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 NLRP10Q86W26 655 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 KCNH3Q9ULD8 1083 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 RIPOR2Q9Y4F9 1068 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 ZNF142P52746 1687 aaPredicted RBP22.87■■□□□ 1.25
CRLF3-201ENST00000324238 MYL5Q02045 173 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 USP49Q70CQ1 688 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 MAP3K14Q99558 947 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 ARMT1Q9H993 441 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 ZSWIM5Q9P217 1185 aa22.87■■□□□ 1.25
CRLF3-201ENST00000324238 IFIT3O14879 490 aaKnown RBP22.86■■□□□ 1.25
CRLF3-201ENST00000324238 COBLO75128 1261 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 PDE6AP16499 860 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 NR5A1Q13285 461 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.86■■□□□ 1.253e-7■■■■■ 42.3
CRLF3-201ENST00000324238 INTS13Q9NVM9 706 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.86■■□□□ 1.25
CRLF3-201ENST00000324238 UBN2Q6ZU65 1347 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 PCCAP05165 728 aaPredicted RBP22.86■■□□□ 1.25
CRLF3-201ENST00000324238 CASP1P29466 404 aa22.86■■□□□ 1.25
CRLF3-201ENST00000324238 AIDAQ96BJ3 306 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms