RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 DDX27Q96GQ7 796 aaKnown RBP18.87■□□□□ 0.61
SMCHD1-201ENST00000320876 PDE1CQ14123 709 aaPredicted RBP18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 SPOPO43791 374 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 LUC7L3O95232 432 aaKnown RBP18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 DPH6Q7L8W6 267 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 RAPGEF1Q13905 1077 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 GIPC1O14908 333 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 PI4KAP2A4QPH2 592 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 PI4KAP1Q8N8J0 262 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 ELF2Q15723 593 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 SYCE1Q8N0S2 351 aa18.86■□□□□ 0.61
SMCHD1-201ENST00000320876 MUM1Q2TAK8 710 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 B4DLN1 442 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 IGSF3O75054 1194 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 PAK2Q13177 524 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 PLCD3Q8N3E9 789 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 TSPYL2Q9H2G4 693 aaPredicted RBP18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 CABS1Q96KC9 395 aa18.85■□□□□ 0.61
SMCHD1-201ENST00000320876 ABCC5O15440 1437 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 VSIG1Q86XK7 387 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 C6orf229H3BNL8 230 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 AK2P54819 239 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 RAD50Q92878 1312 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 U2AF2P26368 475 aaKnown RBP eCLIP18.84■□□□□ 0.617e-7■■■□□ 18.5
SMCHD1-201ENST00000320876 STX17P56962 302 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 PRR16Q569H4 304 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 KRT5P13647 590 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 CFAP221Q4G0U5 840 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 HVCN1Q96D96 273 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 SUDS3Q9H7L9 328 aaPredicted RBP18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 STX10O60499 249 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 LIN9Q5TKA1 542 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 ATP2A3Q93084 1043 aa18.84■□□□□ 0.61
SMCHD1-201ENST00000320876 C8orf34Q49A92 452 aa18.83■□□□□ 0.61
SMCHD1-201ENST00000320876 PNMA8AQ86V59 439 aaPredicted RBP18.83■□□□□ 0.61
SMCHD1-201ENST00000320876 FAM204AQ9H8W3 233 aa18.83■□□□□ 0.61
SMCHD1-201ENST00000320876 RASA3Q14644 834 aa18.83■□□□□ 0.61
SMCHD1-201ENST00000320876 PLCD1P51178 756 aa18.83■□□□□ 0.6
SMCHD1-201ENST00000320876 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
SMCHD1-201ENST00000320876 LGSNQ5TDP6 509 aa18.83■□□□□ 0.6
SMCHD1-201ENST00000320876 RPGRIP1Q96KN7 1286 aa18.83■□□□□ 0.6
SMCHD1-201ENST00000320876 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.6
SMCHD1-201ENST00000320876 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 USHBP1Q8N6Y0 703 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 SLC8A1P32418 973 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 ZBTB17Q13105 803 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 GSDMBQ8TAX9 411 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 Q9H521 79 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 GPTP24298 496 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 CYP7A1P22680 504 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 ST5P78524 1137 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 HAUS2Q9NVX0 235 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 PARP2Q9UGN5 583 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 MGEA5O60502 916 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 ZBTB9Q96C00 473 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 CALUO43852 315 aaPredicted RBP18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 HHATQ5VTY9 493 aa18.82■□□□□ 0.6
SMCHD1-201ENST00000320876 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 MYCBPQ99417 103 aaPredicted RBP18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 SLC8A3P57103 927 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 HAUS7Q99871 368 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 ANKRD44Q8N8A2 993 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 NAP1L4Q99733 375 aaKnown RBP18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 GRM8O00222 908 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 RAB17Q9H0T7 212 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
SMCHD1-201ENST00000320876 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 ASIC2Q16515 512 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 DHX32Q7L7V1 743 aaKnown RBP18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 SMTNP53814 917 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 GCKP35557 465 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 MAGEB6P1A0A0J9YX57 407 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 IQCDQ96DY2 449 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 VWA3AA6NCI4 1184 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 TXNDC9O14530 226 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 PLCG2P16885 1265 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 ANKRD13DQ6ZTN6 518 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
SMCHD1-201ENST00000320876 ARHGAP6O43182 974 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 PPP1R21Q6ZMI0 780 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 TCEANC2Q96MN5 208 aa18.79■□□□□ 0.6
SMCHD1-201ENST00000320876 PPFIA4O75335 1185 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms