RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
CCDC65-202ENST00000320516 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
CCDC65-202ENST00000320516 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
CCDC65-202ENST00000320516 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
CCDC65-202ENST00000320516 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
CCDC65-202ENST00000320516 ABCF2Q9UG63 623 aa12.23□□□□□ -0.45
CCDC65-202ENST00000320516 UQCRFS1P1P0C7P4 283 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
CCDC65-202ENST00000320516 TM4SF4P48230 202 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 NFIAQ12857 509 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 SPTY2D1Q68D10 685 aaPredicted RBP12.22□□□□□ -0.45
CCDC65-202ENST00000320516 ANKRD13AQ8IZ07 590 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 EAF2Q96CJ1 260 aaPredicted RBP12.22□□□□□ -0.45
CCDC65-202ENST00000320516 SLC10A4Q96EP9 437 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
CCDC65-202ENST00000320516 DBNLQ9UJU6 430 aaKnown RBP12.22□□□□□ -0.45
CCDC65-202ENST00000320516 EXOC6BQ9Y2D4 811 aa12.22□□□□□ -0.45
CCDC65-202ENST00000320516 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
CCDC65-202ENST00000320516 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
CCDC65-202ENST00000320516 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
CCDC65-202ENST00000320516 FAM151AQ8WW52 585 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 OTOFQ9HC10 1997 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
CCDC65-202ENST00000320516 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.46
CCDC65-202ENST00000320516 TRPA1O75762 1119 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 ZBTB48P10074 688 aaPredicted RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 GJA5P36382 358 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 MECOMQ03112 1051 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 USP40Q9NVE5 1235 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 AKAP11Q9UKA4 1901 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 LAMB1P07942 1786 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 MROH7-TTC4A0A0A0MT08 1334 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 IDI2Q9BXS1 227 aa12.2□□□□□ -0.46
CCDC65-202ENST00000320516 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
CCDC65-202ENST00000320516 GPR75-ASB3A0A0A6YYF3 556 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 TCP10Q12799 353 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
CCDC65-202ENST00000320516 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-202ENST00000320516 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-202ENST00000320516 BTDP43251 543 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 RHBDL3P58872 404 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 MAPK8IP2Q13387 824 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-202ENST00000320516 VGLL4Q14135 290 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 RHPN1Q8TCX5 695 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-202ENST00000320516 HMMRO75330 724 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 ENTPD3O75355 529 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 RGS3P49796 1198 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
CCDC65-202ENST00000320516 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
CCDC65-202ENST00000320516 LDHCP07864 332 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 ZAP70P43403 619 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 INHBEP58166 350 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 GSTO1P78417 241 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 DCAF15Q66K64 600 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 MIGA2Q7L4E1 593 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 AACSQ86V21 672 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 IL1RAPL2Q9NP60 686 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
CCDC65-202ENST00000320516 RAI14Q9P0K7 980 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
CCDC65-202ENST00000320516 LRP2BPQ9P2M1 347 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 SNCAIPQ9Y6H5 919 aa12.17□□□□□ -0.46
CCDC65-202ENST00000320516 IGSF3O75054 1194 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
CCDC65-202ENST00000320516 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 ZNF341Q9BYN7 854 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 CSADQ9Y600 493 aa12.16□□□□□ -0.46
CCDC65-202ENST00000320516 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms