RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ZBTB22O15209 634 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 LDHCP07864 332 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 AGBL3Q8NEM8 1001 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 TDRD3Q9H7E2 651 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 BAG3O95817 575 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 APOBEC3HQ6NTF7 200 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 GPC2Q8N158 579 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 TGFBRAP1Q8WUH2 860 aa18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 PRMT6Q96LA8 375 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-202ENST00000318007 GAKO14976 1311 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 USP5P45974 858 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 HAND2P61296 217 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 EPB41L4AQ9HCS5 686 aaPredicted RBP18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 MYOZ2Q9NPC6 264 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 USP40Q9NVE5 1235 aa18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
PDLIM5-202ENST00000318007 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 EPS15P42566 896 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 EVX2Q03828 476 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 DLGAP5Q15398 846 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 TEX11Q8IYF3 940 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 SERPINA10Q9UK55 444 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 TDO2P48775 406 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 TCP10Q12799 353 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 CDC42EP5Q6NZY7 148 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
PDLIM5-202ENST00000318007 ASTN2O75129 1339 aaPredicted RBP18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 GSG1L2A8MUP6 293 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 NFIAQ12857 509 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 DPY19L2Q6NUT2 758 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 HHIPL2Q6UWX4 724 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 ZDHHC15Q96MV8 337 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 CRNKL1Q9BZJ0 848 aaKnown RBP18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 TAF6LQ9Y6J9 622 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 FGAP02671 866 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 RHBDL3P58872 404 aa18.41■□□□□ 0.54
PDLIM5-202ENST00000318007 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 RPS12P25398 132 aaKnown RBP18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 IFNL3Q8IZI9 196 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 TRPM4Q8TD43 1214 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 MAP4K1Q92918 833 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 NAPBQ9H115 298 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
PDLIM5-202ENST00000318007 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.54
PDLIM5-202ENST00000318007 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 TCP10L2B9ZVM9 353 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 WNT10BO00744 389 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 H7C1D1 291 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 DCP1AQ9NPI6 582 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 MCM9Q9NXL9 1143 aa18.39■□□□□ 0.53
PDLIM5-202ENST00000318007 CYP2D6P10635 497 aa18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 LMOD1P29536 600 aaPredicted RBP18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 DPF2Q92785 391 aa18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 DSCC1Q9BVC3 393 aa18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 FLT1P17948 1338 aa18.38■□□□□ 0.53
PDLIM5-202ENST00000318007 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 GNAT2P19087 354 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 PPP4CP60510 307 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 INCENPQ9NQS7 918 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 CYP21A2P08686 494 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 SLURP2P0DP57 97 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 HDLBPQ00341 1268 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 NACAP1Q9BZK3 213 aa18.37■□□□□ 0.53
PDLIM5-202ENST00000318007 USP17L12C9JPN9 530 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 USP17L21D6R901 530 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 SLC27A2O14975 620 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
PDLIM5-202ENST00000318007 MYO1BO43795 1136 aa18.35■□□□□ 0.53
PDLIM5-202ENST00000318007 PLCG2P16885 1265 aa18.35■□□□□ 0.53
PDLIM5-202ENST00000318007 MCCP23508 829 aa18.35■□□□□ 0.53
PDLIM5-202ENST00000318007 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms