RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FAM151AQ8WW52 585 aa21.93■■□□□ 1.1
TPM1-203ENST00000317516 OPTNQ96CV9 577 aa21.93■■□□□ 1.1
TPM1-203ENST00000317516 AKAP11Q9UKA4 1901 aa21.93■■□□□ 1.1
TPM1-203ENST00000317516 ECM29Q5VYK3 1845 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 FKTNO75072 461 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 RASGRF1Q13972 1273 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 CDC42EP5Q6NZY7 148 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 USP40Q9NVE5 1235 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 ABCF2Q9UG63 623 aa21.92■■□□□ 1.1
TPM1-203ENST00000317516 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
TPM1-203ENST00000317516 VGLL4Q14135 290 aa21.91■■□□□ 1.1
TPM1-203ENST00000317516 DZIP1Q86YF9 867 aaKnown RBP21.91■■□□□ 1.1
TPM1-203ENST00000317516 ITPRIPQ8IWB1 547 aa21.91■■□□□ 1.1
TPM1-203ENST00000317516 ARAP2Q8WZ64 1704 aa21.9■■□□□ 1.1
TPM1-203ENST00000317516 TESPA1A2RU30 521 aaPredicted RBP21.9■■□□□ 1.1
TPM1-203ENST00000317516 GJA5P36382 358 aa21.9■■□□□ 1.1
TPM1-203ENST00000317516 GTF2A2P52657 109 aa21.9■■□□□ 1.1
TPM1-203ENST00000317516 WRNIP1Q96S55 665 aa21.9■■□□□ 1.1
TPM1-203ENST00000317516 RPAP1Q9BWH6 1393 aaPredicted RBP21.89■■□□□ 1.1
TPM1-203ENST00000317516 IGF2BP3O00425 579 aaKnown RBP eCLIP21.89■■□□□ 1.09
TPM1-203ENST00000317516 TCP10Q12799 353 aa21.89■■□□□ 1.09
TPM1-203ENST00000317516 OS9Q13438 667 aaPredicted RBP21.89■■□□□ 1.09
TPM1-203ENST00000317516 ERICH6Q7L0X2 663 aa21.89■■□□□ 1.09
TPM1-203ENST00000317516 ZNF341Q9BYN7 854 aa21.89■■□□□ 1.09
TPM1-203ENST00000317516 ZBTB7BO15156 539 aaPredicted RBP21.88■■□□□ 1.09
TPM1-203ENST00000317516 POLA2Q14181 598 aa21.88■■□□□ 1.09
TPM1-203ENST00000317516 ERO1BQ86YB8 467 aa21.88■■□□□ 1.09
TPM1-203ENST00000317516 SSH3Q8TE77 659 aa21.88■■□□□ 1.09
TPM1-203ENST00000317516 FAM163AQ96GL9 167 aaPredicted RBP21.88■■□□□ 1.09
TPM1-203ENST00000317516 SURF6O75683 361 aaKnown RBP21.87■■□□□ 1.09
TPM1-203ENST00000317516 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 MS4A1P11836 297 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 RGS19P49795 217 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 MIGA2Q7L4E1 593 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 SPATA5Q8NB90 893 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 OTUD5Q96G74 571 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 MS4A4AQ96JQ5 239 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 R3HDMLQ9H3Y0 253 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 GPR108Q9NPR9 543 aa21.87■■□□□ 1.09
TPM1-203ENST00000317516 SPDYE5A6NIY4 337 aa21.86■■□□□ 1.09
TPM1-203ENST00000317516 WDHD1O75717 1129 aaPredicted RBP21.86■■□□□ 1.09
TPM1-203ENST00000317516 NFIAQ12857 509 aa21.86■■□□□ 1.09
TPM1-203ENST00000317516 PTPN18Q99952 460 aa21.86■■□□□ 1.09
TPM1-203ENST00000317516 HMG20BQ9P0W2 317 aa21.86■■□□□ 1.09
TPM1-203ENST00000317516 GAKO14976 1311 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 CCL15-CCL14A0A0B4J2E2 113 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 ENTPD3O75355 529 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 LDHCP07864 332 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 RLBP1P12271 317 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 GSTO1P78417 241 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 CCL15Q16663 113 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 CCDC158Q5M9N0 1113 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 CNKSR2Q8WXI2 1034 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 ZKSCAN4Q969J2 545 aaPredicted RBP21.85■■□□□ 1.09
TPM1-203ENST00000317516 IDI2Q9BXS1 227 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 FAM198AQ9UFP1 575 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 SNCAIPQ9Y6H5 919 aa21.85■■□□□ 1.09
TPM1-203ENST00000317516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.85■■□□□ 1.09
TPM1-203ENST00000317516 CETPP11597 493 aa21.84■■□□□ 1.09
TPM1-203ENST00000317516 ARID4AP29374 1257 aaPredicted RBP21.84■■□□□ 1.09
TPM1-203ENST00000317516 MLLT1Q03111 559 aaPredicted RBP21.84■■□□□ 1.09
TPM1-203ENST00000317516 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
TPM1-203ENST00000317516 MECOMQ03112 1051 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 PPATQ06203 517 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 CRHR2Q13324 411 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 SNAPC2Q13487 334 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 FBXO46Q6PJ61 603 aaPredicted RBP21.83■■□□□ 1.09
TPM1-203ENST00000317516 BRI3BPQ8WY22 251 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 ERO1AQ96HE7 468 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 ZFYVE28Q9HCC9 887 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 ZNF112Q9UJU3 913 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 HPS5Q9UPZ3 1129 aa21.83■■□□□ 1.09
TPM1-203ENST00000317516 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
TPM1-203ENST00000317516 MAP4K4O95819 1239 aaPredicted RBP21.82■■□□□ 1.08
TPM1-203ENST00000317516 BTDP43251 543 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 RGS3P49796 1198 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 PPIL2Q13356 520 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 TNNI3KQ59H18 835 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 TTC39AQ5SRH9 613 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 ZSCAN29Q8IWY8 852 aaPredicted RBP21.82■■□□□ 1.08
TPM1-203ENST00000317516 RAI14Q9P0K7 980 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 LRP2BPQ9P2M1 347 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 FPGT-TNNI3KV9GXZ4 949 aa21.82■■□□□ 1.08
TPM1-203ENST00000317516 MROH7-TTC4A0A0A0MT08 1334 aa21.81■■□□□ 1.08
TPM1-203ENST00000317516 GPR75-ASB3A0A0A6YYF3 556 aa21.81■■□□□ 1.08
TPM1-203ENST00000317516 IRF6O14896 467 aa21.81■■□□□ 1.08
TPM1-203ENST00000317516 INPP5BP32019 993 aa21.81■■□□□ 1.08
TPM1-203ENST00000317516 TAF1CQ15572 869 aaPredicted RBP21.81■■□□□ 1.08
TPM1-203ENST00000317516 SP3Q02447 781 aa21.8■■□□□ 1.08
TPM1-203ENST00000317516 ARHGEF6Q15052 776 aa21.8■■□□□ 1.08
TPM1-203ENST00000317516 TBC1D9Q6ZT07 1266 aa21.8■■□□□ 1.08
TPM1-203ENST00000317516 ZFPM1Q8IX07 1006 aa21.8■■□□□ 1.08
TPM1-203ENST00000317516 ZCCHC17Q9NP64 241 aaKnown RBP21.8■■□□□ 1.08
TPM1-203ENST00000317516 TRIM17Q9Y577 477 aa21.8■■□□□ 1.08
TPM1-203ENST00000317516 MCAMP43121 646 aa21.79■■□□□ 1.08
TPM1-203ENST00000317516 PI16Q6UXB8 463 aa21.79■■□□□ 1.08
TPM1-203ENST00000317516 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
TPM1-203ENST00000317516 NSUN4Q96CB9 384 aaKnown RBP21.79■■□□□ 1.08
TPM1-203ENST00000317516 NOL10Q9BSC4 688 aaKnown RBP21.79■■□□□ 1.08
TPM1-203ENST00000317516 IGSF3O75054 1194 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms