RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
BDNF-201ENST00000314915 PARP3Q9Y6F1 533 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 ZNF165P49910 485 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 NEK2P51955 445 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 HDAC4P56524 1084 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 CTNNBL1Q8WYA6 563 aaPredicted RBP10.52□□□□□ -0.73
BDNF-201ENST00000314915 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 MAK16Q9BXY0 300 aaKnown RBP10.52□□□□□ -0.73
BDNF-201ENST00000314915 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 PCDH18Q9HCL0 1135 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 PUF60Q9UHX1 559 aaKnown RBP10.52□□□□□ -0.73
BDNF-201ENST00000314915 TMCO1Q9UM00 188 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 LRRD1A4D1F6 860 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 ABLIM1O14639 778 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 MGRN1O60291 552 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 ABL2P42684 1182 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 PSME1Q06323 249 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 CRELD2Q6UXH1 353 aaPredicted RBP10.52□□□□□ -0.73
BDNF-201ENST00000314915 CATIPQ7Z7H3 387 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 CCDC13Q8IYE1 715 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 TEX9Q8N6V9 391 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.73
BDNF-201ENST00000314915 ZFATQ9P243 1243 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 ATXN10Q9UBB4 475 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
BDNF-201ENST00000314915 A6NHS1 94 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 NDUFAB1O14561 156 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 CYP27B1O15528 508 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 PDE6BP35913 854 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 FAAH2Q6GMR7 532 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 OSBPL5Q9H0X9 879 aaPredicted RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 TPX2Q9ULW0 747 aaKnown RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 N6AMT1Q9Y5N5 214 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 CDHR2Q9BYE9 1310 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 TMCC1O94876 653 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 PDHBP11177 359 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 CCDC70Q6NSX1 233 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 WDR66Q8TBY9 1149 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 C15orf41Q9Y2V0 281 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 PER1O15534 1290 aaPredicted RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 ATP4AP20648 1035 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 MECOMQ03112 1051 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 STK11IPQ8N1F8 1099 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 NRDE2Q9H7Z3 1164 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 GALNT8Q9NY28 637 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 MAGEC2Q9UBF1 373 aaPredicted RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 TMED5Q9Y3A6 229 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 BZW2Q9Y6E2 419 aaKnown RBP10.51□□□□□ -0.73
BDNF-201ENST00000314915 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
BDNF-201ENST00000314915 CSB-PGBD3P0DP91 1061 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 IDO1P14902 403 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 TMF1P82094 1093 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 ZFYVE27Q5T4F4 411 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 INTS3Q68E01 1043 aaKnown RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 BICDL1Q6ZP65 573 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 DZIP1LQ8IYY4 767 aaKnown RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 FUKQ8N0W3 1084 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 ZBTB8BQ8NAP8 495 aaPredicted RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 SH3GL1Q99961 368 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 GRIN2AQ12879 1464 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 LINGO3P0C6S8 592 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 HSPA4P34932 840 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 RNF187Q5TA31 235 aaPredicted RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 EPC1Q9H2F5 836 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 PRDM15P57071 1507 aaPredicted RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 CTCFP49711 727 aaPredicted RBP10.5□□□□□ -0.73
BDNF-201ENST00000314915 TMEM62Q0P6H9 643 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 HELLSQ9NRZ9 838 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 SYNMO15061 1565 aa10.5□□□□□ -0.73
BDNF-201ENST00000314915 CBFA2T2O43439 604 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 EVI5O60447 810 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 ALOX15P16050 662 aaPredicted RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 SFPQP23246 707 aaKnown RBP eCLIP10.49□□□□□ -0.73
BDNF-201ENST00000314915 ALDH3A1P30838 453 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 COPB2P35606 906 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 TUBB2AQ13885 445 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 MAP7D1Q3KQU3 841 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 TTC30AQ86WT1 665 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 TUBB2BQ9BVA1 445 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 FBXO9Q9UK97 447 aaPredicted RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 CROTQ9UKG9 612 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 CNPY2Q9Y2B0 182 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 MARCH6O60337 910 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 STK10O94804 968 aaKnown RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 PRPF6O94906 941 aaKnown RBP10.49□□□□□ -0.73
BDNF-201ENST00000314915 TROVE2P10155 538 aaKnown RBP eCLIP10.49□□□□□ -0.73
BDNF-201ENST00000314915 INHBCP55103 352 aa10.49□□□□□ -0.73
BDNF-201ENST00000314915 RCN1Q15293 331 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms