RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.01■□□□□ 0.474e-37■■□□□ 14.5
PPP1CA-201ENST00000312989 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
PPP1CA-201ENST00000312989 ATRNL1Q5VV63 1379 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 OTOFQ9HC10 1997 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 TM4SF4P48230 202 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 PDE3AQ14432 1141 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 TBC1D9Q6ZT07 1266 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 ZNF512BQ96KM6 892 aaPredicted RBP18■□□□□ 0.47
PPP1CA-201ENST00000312989 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 EXOC6BQ9Y2D4 811 aa18■□□□□ 0.47
PPP1CA-201ENST00000312989 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 TNNI2P48788 182 aa17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 MECOMQ03112 1051 aa17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 MKRN3Q13064 507 aaKnown RBP17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 ZFPM1Q8IX07 1006 aa17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 WNK4Q96J92 1243 aa17.99■□□□□ 0.47
PPP1CA-201ENST00000312989 LAMB1P07942 1786 aa17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 RHBDL3P58872 404 aa17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 FAM151AQ8WW52 585 aa17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 IDI2Q9BXS1 227 aa17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 ABCF2Q9UG63 623 aa17.98■□□□□ 0.47
PPP1CA-201ENST00000312989 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 TRPA1O75762 1119 aa17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 ANKRD13AQ8IZ07 590 aa17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
PPP1CA-201ENST00000312989 GPR75-ASB3A0A0A6YYF3 556 aa17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 CYP2E1P05181 493 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 UQCRFS1P1P0C7P4 283 aa17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 OS9Q13438 667 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 VGLL4Q14135 290 aa17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 DDX4Q9NQI0 724 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 USP40Q9NVE5 1235 aa17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 SNCAIPQ9Y6H5 919 aa17.96■□□□□ 0.47
PPP1CA-201ENST00000312989 AKAP11Q9UKA4 1901 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 BTDP43251 543 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 DZIP1Q86YF9 867 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 SLC10A4Q96EP9 437 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 CFHR5Q9BXR6 569 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 SNRKQ9NRH2 765 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 TMOD2Q9NZR1 351 aa17.95■□□□□ 0.46
PPP1CA-201ENST00000312989 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 IGF2BP3O00425 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 TCP10Q12799 353 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 RHPN1Q8TCX5 695 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 MS4A4AQ96JQ5 239 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 R3HDMLQ9H3Y0 253 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 ZNF112Q9UJU3 913 aa17.94■□□□□ 0.46
PPP1CA-201ENST00000312989 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 ZAP70P43403 619 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 RGS3P49796 1198 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 MAP3K9P80192 1104 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 PTPN18Q99952 460 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 PIH1D3Q9NQM4 214 aaKnown RBP17.93■□□□□ 0.46
PPP1CA-201ENST00000312989 ENTPD3O75355 529 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 MAP3K10Q02779 954 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 CCDC158Q5M9N0 1113 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 TTC39AQ5SRH9 613 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
PPP1CA-201ENST00000312989 DDTLA6NHG4 134 aaPredicted RBP17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 MANSC4A6NHS7 340 aaPredicted RBP17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 SPDYE5A6NIY4 337 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 SREBF2Q12772 1141 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 MIGA2Q7L4E1 593 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 IFNL1Q8IU54 200 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 ZKSCAN4Q969J2 545 aaPredicted RBP17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 NDUFB9Q9Y6M9 179 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 MAST2Q6P0Q8 1798 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 TBC1D8O95759 1140 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 INPP5BP32019 993 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 AACSQ86V21 672 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 WRNIP1Q96S55 665 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 RAI14Q9P0K7 980 aa17.91■□□□□ 0.46
PPP1CA-201ENST00000312989 MYH2Q9UKX2 1941 aa17.9■□□□□ 0.46
PPP1CA-201ENST00000312989 HTTP42858 3142 aa17.9■□□□□ 0.46
PPP1CA-201ENST00000312989 PHF20L1A8MW92 1017 aa17.9■□□□□ 0.46
PPP1CA-201ENST00000312989 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
PPP1CA-201ENST00000312989 SLF2Q8IX21 1173 aa17.9■□□□□ 0.46
PPP1CA-201ENST00000312989 COL2A1P02458 1487 aaPredicted RBP17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 BRI3BPQ8WY22 251 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms