RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GOLIM4O00461 696 aa14.74□□□□□ -0.05
SCFD1-201ENST00000311943 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
SCFD1-201ENST00000311943 BTDP43251 543 aa14.74□□□□□ -0.05
SCFD1-201ENST00000311943 DYNLL1P63167 89 aaKnown RBP14.74□□□□□ -0.05
SCFD1-201ENST00000311943 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
SCFD1-201ENST00000311943 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
SCFD1-201ENST00000311943 USP40Q9NVE5 1235 aa14.74□□□□□ -0.05
SCFD1-201ENST00000311943 RASSF10A6NK89 507 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 MYO1BO43795 1136 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 SLC4A8Q2Y0W8 1093 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 MIGA1Q8NAN2 632 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 GAKO14976 1311 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 RHBDL3P58872 404 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 HDLBPQ00341 1268 aaKnown RBP14.73□□□□□ -0.05
SCFD1-201ENST00000311943 PICALMQ13492 652 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 TTLL12Q14166 644 aaPredicted RBP14.73□□□□□ -0.05
SCFD1-201ENST00000311943 ANKRD45Q5TZF3 282 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 MIGA2Q7L4E1 593 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 SKAP1Q86WV1 359 aa14.73□□□□□ -0.05
SCFD1-201ENST00000311943 APOBEC3FQ8IUX4 373 aaKnown RBP14.73□□□□□ -0.05
SCFD1-201ENST00000311943 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCFD1-201ENST00000311943 SH3RF3Q8TEJ3 882 aaPredicted RBP14.72□□□□□ -0.05
SCFD1-201ENST00000311943 ZNF512BQ96KM6 892 aaPredicted RBP14.72□□□□□ -0.05
SCFD1-201ENST00000311943 CAPNS2Q96L46 248 aa14.72□□□□□ -0.05
SCFD1-201ENST00000311943 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
SCFD1-201ENST00000311943 SUGT1Q9Y2Z0 365 aa14.72□□□□□ -0.05
SCFD1-201ENST00000311943 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
SCFD1-201ENST00000311943 PDS5AQ29RF7 1337 aaKnown RBP14.72□□□□□ -0.05
SCFD1-201ENST00000311943 FAM196BA6NMK8 535 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 WDHD1O75717 1129 aaPredicted RBP14.71□□□□□ -0.05
SCFD1-201ENST00000311943 EVX2Q03828 476 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 MAGEB6Q8N7X4 407 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 WDR33Q9C0J8 1336 aaKnown RBP14.71□□□□□ -0.05
SCFD1-201ENST00000311943 C2orf69Q8N8R5 385 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 MRIQ9BWK5 157 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
SCFD1-201ENST00000311943 DDTLA6NHG4 134 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 FAM155AB1AL88 458 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 USP2O75604 605 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 RGS3P49796 1198 aa14.7□□□□□ -0.06
SCFD1-201ENST00000311943 HDAC1Q13547 482 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 TSKSQ9UJT2 592 aa14.7□□□□□ -0.06
SCFD1-201ENST00000311943 MAST3O60307 1309 aa14.7□□□□□ -0.06
SCFD1-201ENST00000311943 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
SCFD1-201ENST00000311943 CYP7A1P22680 504 aa14.7□□□□□ -0.06
SCFD1-201ENST00000311943 NAA16Q6N069 864 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 ZGPATQ8N5A5 531 aaKnown RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.7□□□□□ -0.06
SCFD1-201ENST00000311943 SMIM22K7EJ46 135 aa14.69□□□□□ -0.06
SCFD1-201ENST00000311943 ZNF157P51786 506 aaPredicted RBP14.69□□□□□ -0.06
SCFD1-201ENST00000311943 ZBTB22O15209 634 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 ATP5JP18859 108 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 SPTY2D1Q68D10 685 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-201ENST00000311943 RGMBQ6NW40 437 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-201ENST00000311943 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 JMYQ8N9B5 988 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 PI4K2BQ8TCG2 481 aa14.68□□□□□ -0.06
SCFD1-201ENST00000311943 ZKSCAN4Q969J2 545 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-201ENST00000311943 SALL3Q9BXA9 1300 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 MMP14P50281 582 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 SHROOM1Q2M3G4 852 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-201ENST00000311943 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 MAPKAPK5Q8IW41 473 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 HAUS7Q99871 368 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 PAG1Q9NWQ8 432 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 DOCK2Q92608 1830 aa14.67□□□□□ -0.06
SCFD1-201ENST00000311943 INPP5BP32019 993 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 GJA5P36382 358 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-201ENST00000311943 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-201ENST00000311943 RASAL3Q86YV0 1011 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 TGFBRAP1Q8WUH2 860 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 PAPPA2Q9BXP8 1791 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 TCRBV5S4A2TA0A5A2 114 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
SCFD1-201ENST00000311943 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
SCFD1-201ENST00000311943 PDE6AP16499 860 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 LDLRAD1Q5T700 205 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 TMOD2Q9NZR1 351 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 SAP30BPQ9UHR5 308 aaKnown RBP14.66□□□□□ -0.06
SCFD1-201ENST00000311943 OTOFQ9HC10 1997 aa14.66□□□□□ -0.06
SCFD1-201ENST00000311943 PRKAB2O43741 272 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 KIF23Q02241 960 aaPredicted RBP14.65□□□□□ -0.06
SCFD1-201ENST00000311943 RRP1BQ14684 758 aaKnown RBP14.65□□□□□ -0.06
SCFD1-201ENST00000311943 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
SCFD1-201ENST00000311943 ELP3Q9H9T3 547 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 FAM83AQ86UY5 434 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 TEX11Q8IYF3 940 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 IDI2Q9BXS1 227 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 PALD1Q9ULE6 856 aa14.65□□□□□ -0.06
SCFD1-201ENST00000311943 CDK5RAP2Q96SN8 1893 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms