RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RSBN1LQ6PCB5 846 aaPredicted RBP9.96□□□□□ -0.81
CHD6-201ENST00000309279 AGBL3Q8NEM8 1001 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 DPF2Q92785 391 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 DENND2AQ9ULE3 1009 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 MYO3BQ8WXR4 1341 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 TTC36A6NLP5 189 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 UQCRFS1P1P0C7P4 283 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 SCNN1DP51172 638 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 NUCB1Q02818 461 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 RASGRF1Q13972 1273 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
CHD6-201ENST00000309279 GPATCH3Q96I76 525 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 IQSEC3Q9UPP2 1182 aaPredicted RBP9.96□□□□□ -0.82
CHD6-201ENST00000309279 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
CHD6-201ENST00000309279 GJA3Q9Y6H8 435 aa9.96□□□□□ -0.82
CHD6-201ENST00000309279 COL1A1P02452 1464 aaPredicted RBP9.96□□□□□ -0.82
CHD6-201ENST00000309279 SALL1Q9NSC2 1324 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 FRAT2O75474 233 aaPredicted RBP9.95□□□□□ -0.82
CHD6-201ENST00000309279 MCAMP43121 646 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 WDR66Q8TBY9 1149 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHD6-201ENST00000309279 TBC1D22AQ8WUA7 517 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 MAF1Q9H063 256 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 GPRC5DQ9NZD1 345 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 PNMA2Q9UL42 364 aa9.95□□□□□ -0.82
CHD6-201ENST00000309279 SALL3Q9BXA9 1300 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 IQCA1LA6NCM1 817 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 GMPSP49915 693 aaPredicted RBP9.94□□□□□ -0.82
CHD6-201ENST00000309279 APLP1P51693 650 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 SCARF1Q14162 830 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
CHD6-201ENST00000309279 MFSD14BQ5SR56 506 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 TTC39AQ5SRH9 613 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
CHD6-201ENST00000309279 SPATA5Q8NB90 893 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
CHD6-201ENST00000309279 VTI1AQ96AJ9 217 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 MXD3Q9BW11 206 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 CNOT7Q9UIV1 285 aaKnown RBP9.94□□□□□ -0.82
CHD6-201ENST00000309279 JAG2Q9Y219 1238 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
CHD6-201ENST00000309279 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 ATP5JP18859 108 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 PAX3P23760 479 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 ZNF280AP59817 542 aaPredicted RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 CHAF1AQ13111 956 aaPredicted RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 MRIQ9BWK5 157 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 METTL14Q9HCE5 456 aaKnown RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 ECHDC1Q9NTX5 307 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 TTC41PQ6P2S7 1318 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 CCDC194A0A1B0GVG4 234 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 SH3BP5O60239 455 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 PARNO95453 639 aaKnown RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 EPS15P42566 896 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 CCDC96Q2M329 555 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 KRI1Q8N9T8 703 aaKnown RBP9.93□□□□□ -0.82
CHD6-201ENST00000309279 PMM1Q92871 262 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 LNPKQ9C0E8 428 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 NMRK2Q9NPI5 230 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 HACL1Q9UJ83 578 aa9.93□□□□□ -0.82
CHD6-201ENST00000309279 MYO5AQ9Y4I1 1855 aaKnown RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 H7C1D1 291 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 CYP2E1P05181 493 aaPredicted RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 MX1P20591 662 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 LMOD1P29536 600 aaPredicted RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 HDLBPQ00341 1268 aaKnown RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 GRIK5Q16478 980 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 KIAA0825Q8IV33 1275 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 MICALL2Q8IY33 904 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
CHD6-201ENST00000309279 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
CHD6-201ENST00000309279 SHTN1A0MZ66 631 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
CHD6-201ENST00000309279 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
CHD6-201ENST00000309279 EPHX2P34913 555 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 ZAP70P43403 619 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
CHD6-201ENST00000309279 CACTIN-AS1Q8N1I8 211 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 MTMR14Q8NCE2 650 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 HAUS7Q99871 368 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 OSBPL3Q9H4L5 887 aa9.91□□□□□ -0.82
CHD6-201ENST00000309279 TTF2Q9UNY4 1162 aaKnown RBP9.91□□□□□ -0.82
CHD6-201ENST00000309279 KIF3CO14782 793 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms