RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
PHTF2-203ENST00000307305 STX8Q9UNK0 236 aa12.97□□□□□ -0.33
PHTF2-203ENST00000307305 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
PHTF2-203ENST00000307305 NLRP12P59046 1061 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 ELP1O95163 1332 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 IDEP14735 1019 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.33
PHTF2-203ENST00000307305 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.33
PHTF2-203ENST00000307305 TAF3Q5VWG9 929 aa12.96□□□□□ -0.34
PHTF2-203ENST00000307305 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.34
PHTF2-203ENST00000307305 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.34
PHTF2-203ENST00000307305 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.34
PHTF2-203ENST00000307305 SALL3Q9BXA9 1300 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 CARMIL3Q8ND23 1372 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 CASP1P29466 404 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
PHTF2-203ENST00000307305 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
PHTF2-203ENST00000307305 CCDC181Q5TID7 509 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 MRFAP1L1Q96HT8 127 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 VPS18Q9P253 973 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 TCHHQ07283 1943 aa12.95□□□□□ -0.34
PHTF2-203ENST00000307305 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
PHTF2-203ENST00000307305 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PHKA1P46020 1223 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
PHTF2-203ENST00000307305 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
PHTF2-203ENST00000307305 LINC00301Q8NCQ3 95 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■■□□ 17.9
PHTF2-203ENST00000307305 EPS15P42566 896 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 NR5A1Q13285 461 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 STIM1Q13586 685 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 ZMYM1Q5SVZ6 1142 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 IGSF22Q8N9C0 903 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PIK3C2BO00750 1634 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 GYS2P54840 703 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PPP1R13BQ96KQ4 1090 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 PSMB7Q99436 277 aa12.94□□□□□ -0.34
PHTF2-203ENST00000307305 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CCDC175P0C221 793 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 UBA7P41226 1012 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 DMTNQ08495 405 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 TRMT1LQ7Z2T5 733 aaKnown RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 DZIP3Q86Y13 1208 aaKnown RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 GREM2Q9H772 168 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 H0YHG0 523 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 SCARF1Q14162 830 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CALCOCO1Q9P1Z2 691 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 DENND2AQ9ULE3 1009 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 PRKAB2O43741 272 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CDC25AP30304 524 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CRACR2AQ9BSW2 395 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
PHTF2-203ENST00000307305 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
PHTF2-203ENST00000307305 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 ASAP1Q9ULH1 1129 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 CYP27B1O15528 508 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 KRT18P05783 430 aaKnown RBP12.92□□□□□ -0.34
PHTF2-203ENST00000307305 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
PHTF2-203ENST00000307305 SPTLC3Q9NUV7 552 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
PHTF2-203ENST00000307305 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
PHTF2-203ENST00000307305 FOXN1O15353 648 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
PHTF2-203ENST00000307305 TAB2Q9NYJ8 693 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
PHTF2-203ENST00000307305 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
PHTF2-203ENST00000307305 YEATS4O95619 227 aa12.91□□□□□ -0.34
PHTF2-203ENST00000307305 IL2RBP14784 551 aa12.91□□□□□ -0.34
PHTF2-203ENST00000307305 CAPN2P17655 700 aa12.91□□□□□ -0.34
PHTF2-203ENST00000307305 POSTNQ15063 836 aa12.91□□□□□ -0.34
PHTF2-203ENST00000307305 TSPYL1Q9H0U9 437 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms