RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 KIAA1468Q9P260 1216 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 WDR17Q8IZU2 1322 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 DHX58Q96C10 678 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 PCDH11XQ9BZA7 1347 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 PCDH11YQ9BZA8 1340 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 H3BQF6 201 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 DHX16O60231 1041 aaKnown RBP20.59■□□□□ 0.89
RETREG1-201ENST00000306320 TADA3O75528 432 aa20.59■□□□□ 0.89
RETREG1-201ENST00000306320 XAGE2Q96GT9 111 aa20.58■□□□□ 0.89
RETREG1-201ENST00000306320 SLIT3O75094 1523 aa20.58■□□□□ 0.89
RETREG1-201ENST00000306320 FANCGO15287 622 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 IDH1O75874 414 aaKnown RBP20.58■□□□□ 0.88
RETREG1-201ENST00000306320 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.88
RETREG1-201ENST00000306320 RABL6Q3YEC7 729 aaPredicted RBP20.58■□□□□ 0.88
RETREG1-201ENST00000306320 METTL24Q5JXM2 366 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 TNS3Q68CZ2 1445 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 CPLX1O14810 134 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 HSPD1P10809 573 aaKnown RBP20.58■□□□□ 0.88
RETREG1-201ENST00000306320 PPARDQ03181 441 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 TRMT44Q8IYL2 757 aaKnown RBP20.58■□□□□ 0.88
RETREG1-201ENST00000306320 CNNM1Q9NRU3 951 aa20.58■□□□□ 0.88
RETREG1-201ENST00000306320 LMO7Q8WWI1 1683 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 GREM2Q9H772 168 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.88
RETREG1-201ENST00000306320 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 ZRANB2O95218 330 aaKnown RBP eCLIP20.57■□□□□ 0.88
RETREG1-201ENST00000306320 LONRF2Q1L5Z9 754 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 FAN1Q9Y2M0 1017 aa20.57■□□□□ 0.88
RETREG1-201ENST00000306320 ZNF202O95125 648 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 PNOCQ13519 176 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 LONRF3Q496Y0 759 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 HSP90B2PQ58FF3 399 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 PPP2R2CQ9Y2T4 447 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 MAST3O60307 1309 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 ZNF827Q17R98 1081 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 JAKMIP3Q5VZ66 844 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 TOGARAM2Q6ZUX3 1019 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
RETREG1-201ENST00000306320 PUS7LQ9H0K6 701 aaKnown RBP20.56■□□□□ 0.88
RETREG1-201ENST00000306320 FANCLQ9NW38 375 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 FAM53CQ9NYF3 392 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 RCOR1Q9UKL0 485 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 PARP3Q9Y6F1 533 aa20.56■□□□□ 0.88
RETREG1-201ENST00000306320 C5P01031 1676 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 PSDA5PKW4 1024 aaPredicted RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 NUTM2BA6NNL0 878 aaPredicted RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 EFCAB8A8MWE9 144 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 NUTM2EB1AL46 878 aaPredicted RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 MTF1Q14872 753 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 KIF6Q6ZMV9 814 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 TRMT112Q9UI30 125 aaKnown RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
RETREG1-201ENST00000306320 KLHL10Q6JEL2 608 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
RETREG1-201ENST00000306320 E7EWF7 191 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 EPB41L2O43491 1005 aaKnown RBP20.54■□□□□ 0.88
RETREG1-201ENST00000306320 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 DHX37Q8IY37 1157 aaKnown RBP20.54■□□□□ 0.88
RETREG1-201ENST00000306320 C8orf76Q96K31 380 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 OSBPL5Q9H0X9 879 aaPredicted RBP20.54■□□□□ 0.88
RETREG1-201ENST00000306320 U3KPZ7 1027 aaPredicted RBP20.54■□□□□ 0.88
RETREG1-201ENST00000306320 TTC31Q49AM3 519 aaPredicted RBP20.54■□□□□ 0.88
RETREG1-201ENST00000306320 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 NKX2-3Q8TAU0 364 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 SPTLC2O15270 562 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 ZSCAN12O43309 604 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 KIF4BQ2VIQ3 1234 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 SRLQ86TD4 932 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 IMPACTQ9P2X3 320 aa20.54■□□□□ 0.88
RETREG1-201ENST00000306320 NOM1Q5C9Z4 860 aaKnown RBP20.53■□□□□ 0.88
RETREG1-201ENST00000306320 OLFM4Q6UX06 510 aa20.53■□□□□ 0.88
RETREG1-201ENST00000306320 BAG1Q99933 345 aaPredicted RBP20.53■□□□□ 0.88
RETREG1-201ENST00000306320 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
RETREG1-201ENST00000306320 A0A0U1RQJ8 604 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 ITGA6P23229 1130 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 ADD1P35611 737 aaKnown RBP20.52■□□□□ 0.88
RETREG1-201ENST00000306320 ATRIPQ8WXE1 791 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 GOLGA1Q92805 767 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 COBLO75128 1261 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 WDHD1O75717 1129 aaPredicted RBP20.52■□□□□ 0.88
RETREG1-201ENST00000306320 AKAP17AQ02040 695 aaKnown RBP20.52■□□□□ 0.88
RETREG1-201ENST00000306320 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 FKBP15Q5T1M5 1219 aa20.52■□□□□ 0.88
RETREG1-201ENST00000306320 FMR1NBQ8N0W7 255 aaPredicted RBP20.52■□□□□ 0.88
RETREG1-201ENST00000306320 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.87
RETREG1-201ENST00000306320 KRT32Q14532 448 aa20.52■□□□□ 0.87
RETREG1-201ENST00000306320 TRIM65Q6PJ69 517 aa20.52■□□□□ 0.87
RETREG1-201ENST00000306320 CCDC24Q8N4L8 307 aa20.52■□□□□ 0.87
RETREG1-201ENST00000306320 CLIC6Q96NY7 704 aa20.52■□□□□ 0.87
RETREG1-201ENST00000306320 ATG3Q9NT62 314 aa20.52■□□□□ 0.87
RETREG1-201ENST00000306320 MICALL1Q8N3F8 863 aa20.51■□□□□ 0.87
RETREG1-201ENST00000306320 ENGASEQ8NFI3 743 aa20.51■□□□□ 0.87
RETREG1-201ENST00000306320 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
RETREG1-201ENST00000306320 MYL10Q9BUA6 226 aa20.51■□□□□ 0.87
RETREG1-201ENST00000306320 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
RETREG1-201ENST00000306320 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms