RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CHMP6Q96FZ7 201 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 NUCKS1Q9H1E3 243 aaKnown RBP14.93□□□□□ -0.02
TRIM56-201ENST00000306085 FAN1Q9Y2M0 1017 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 CLCN1P35523 988 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 KLF18A0A0U1RQI7 1052 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 TUBBP07437 444 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 GSTA1P08263 222 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 GSTA2P09210 222 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
TRIM56-201ENST00000306085 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 HAUS2Q9NVX0 235 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 ESYT2A0FGR8 921 aa14.93□□□□□ -0.02
TRIM56-201ENST00000306085 NAP1L4Q99733 375 aaKnown RBP14.93□□□□□ -0.02
TRIM56-201ENST00000306085 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 ZBBXA8MT70 800 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 NAPGQ99747 312 aaPredicted RBP14.92□□□□□ -0.02
TRIM56-201ENST00000306085 EPB41P11171 864 aaKnown RBP14.92□□□□□ -0.02
TRIM56-201ENST00000306085 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 LIN9Q5TKA1 542 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 HIP1RO75146 1068 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 LUC7L3O95232 432 aaKnown RBP14.92□□□□□ -0.02
TRIM56-201ENST00000306085 EIF2AQ9BY44 585 aaKnown RBP14.92□□□□□ -0.02
TRIM56-201ENST00000306085 DCLK2Q8N568 766 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 GPTP24298 496 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 RASIP1Q5U651 963 aa14.92□□□□□ -0.02
TRIM56-201ENST00000306085 SKAP1Q86WV1 359 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 AKR1B15C9JRZ8 316 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-201ENST00000306085 LRRC23Q53EV4 343 aaPredicted RBP14.91□□□□□ -0.02
TRIM56-201ENST00000306085 FAM71BQ8TC56 605 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 RUFY4Q6ZNE9 571 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 CAPN7Q9Y6W3 813 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 RAD51AP2Q09MP3 1159 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 LGSNQ5TDP6 509 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 KRT23Q9C075 422 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 NSMCE1Q8WV22 266 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 GOLGA4Q13439 2230 aaKnown RBP14.91□□□□□ -0.02
TRIM56-201ENST00000306085 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
TRIM56-201ENST00000306085 DHX29Q7Z478 1369 aaKnown RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 MMEL1Q495T6 779 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 GSTO1P78417 241 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 MRFAP1L1Q96HT8 127 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 SKA2Q8WVK7 121 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 PPP2R5AQ15172 486 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 HP1BP3Q5SSJ5 553 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 BACH1O14867 736 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 UBE3BQ7Z3V4 1068 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 FNBP1Q96RU3 617 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 DACT1Q9NYF0 836 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 F6X3S4 739 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 F8W031 263 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 KRT2P35908 639 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 KRT12Q99456 494 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 VPS37BQ9H9H4 285 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
TRIM56-201ENST00000306085 NKTRP30414 1462 aaKnown RBP14.9□□□□□ -0.02
TRIM56-201ENST00000306085 ZKSCAN5Q9Y2L8 839 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 SPDYE16A6NNV3 312 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 A6NNZ2 444 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 TUBB8Q3ZCM7 444 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 USTQ9Y2C2 406 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 TROVE2P10155 538 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 FNBP4Q8N3X1 1017 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 SCYL1Q96KG9 808 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 TAF7Q15545 349 aaPredicted RBP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 ANKRD42Q8N9B4 389 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 PSMB7Q99436 277 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 TNNI2P48788 182 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 CLTAP09496 248 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 STX2P32856 288 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 PICALMQ13492 652 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 LRGUKQ96M69 825 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 NOX5Q96PH1 765 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 DNM1Q05193 864 aaKnown RBP14.89□□□□□ -0.03
TRIM56-201ENST00000306085 CCDC105Q8IYK2 499 aa14.89□□□□□ -0.03
TRIM56-201ENST00000306085 TSTA3Q13630 321 aaPredicted RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 SPATS2Q86XZ4 545 aaKnown RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 BZW2Q9Y6E2 419 aaKnown RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 SPATS2LQ9NUQ6 558 aaKnown RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 RAPGEF2Q9Y4G8 1499 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 MRFAP1Q9Y605 127 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 FAM170AA1A519 330 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 B4DLN1 442 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 MRPL12P52815 198 aaKnown RBP14.88□□□□□ -0.03
TRIM56-201ENST00000306085 C4orf50Q6ZRC1 276 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 NBPF6Q5VWK0 638 aa14.88□□□□□ -0.03
TRIM56-201ENST00000306085 NBPF4Q96M43 638 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms