RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 POLR2DO15514 142 aaKnown RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 PLCD1P51178 756 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 SPATA24Q86W54 205 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 PPP1R14CQ8TAE6 165 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 SWAP70Q9UH65 585 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 ATP2A1O14983 1001 aa14.45□□□□□ -0.1
COL3A1-201ENST00000304636 ANGEL1Q9UNK9 670 aaKnown RBP14.45□□□□□ -0.1
COL3A1-201ENST00000304636 MAST1Q9Y2H9 1570 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 MTX1Q13505 466 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 GRIPAP1Q4V328 841 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
COL3A1-201ENST00000304636 FERMT2Q96AC1 680 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 MTMR6Q9Y217 621 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 TLDC2A0PJX2 215 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 EFCAB8A8MWE9 144 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 ADALQ6DHV7 355 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 MAGEB6Q8N7X4 407 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 SECISBP2LQ93073 1101 aaKnown RBP14.44□□□□□ -0.1
COL3A1-201ENST00000304636 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 GCC2Q8IWJ2 1684 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 PPFIA1Q13136 1202 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 SETDB1Q15047 1291 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 ERCC6LQ2NKX8 1250 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 FMNL3Q8IVF7 1028 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 CCDC50Q8IVM0 306 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 PTPRTO14522 1441 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 HLA-DOAP06340 250 aa14.44□□□□□ -0.1
COL3A1-201ENST00000304636 LACTBP83111 547 aaPredicted RBP14.44□□□□□ -0.1
COL3A1-201ENST00000304636 JAK2O60674 1132 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 GNA11P29992 359 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 LRMPQ12912 555 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 PAK1Q13153 545 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 POSTNQ15063 836 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 ZNF174Q15697 407 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
COL3A1-201ENST00000304636 HMGB2P26583 209 aaKnown RBP14.43□□□□□ -0.1
COL3A1-201ENST00000304636 RPGRIP1Q96KN7 1286 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 KIAA1468Q9P260 1216 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 FAM135BQ49AJ0 1406 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
COL3A1-201ENST00000304636 NR1I2O75469 434 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 CCDC51Q96ER9 411 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 RRP36Q96EU6 259 aaKnown RBP14.43□□□□□ -0.1
COL3A1-201ENST00000304636 USP19O94966 1318 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 MXRA7P84157 204 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 VWA3BQ502W6 1294 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 IFT74Q96LB3 600 aa14.43□□□□□ -0.1
COL3A1-201ENST00000304636 YTHDC2Q9H6S0 1430 aaKnown RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 ZNF518AQ6AHZ1 1483 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 SMIM23A6NLE4 172 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 HPDP32754 393 aaPredicted RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 RNMTO43148 476 aaKnown RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 EXOC5O00471 708 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 CDC25BP30305 580 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 ETF1P62495 437 aaKnown RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 ZBTB16Q05516 673 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 TRAF1Q13077 416 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 NAA25Q14CX7 972 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 WHAMMP3Q1A5X7 153 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 DIS3L2Q8IYB7 885 aaKnown RBP14.42□□□□□ -0.1
COL3A1-201ENST00000304636 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 LRRC45Q96CN5 670 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 MTUS1Q9ULD2 1270 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 KRT9P35527 623 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 SV2BQ7L1I2 683 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 NOX5Q96PH1 765 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 DBNDD2Q9BQY9 259 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 ZSWIM6Q9HCJ5 1215 aa14.42□□□□□ -0.1
COL3A1-201ENST00000304636 TNRQ92752 1358 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
COL3A1-201ENST00000304636 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
COL3A1-201ENST00000304636 B4E1Z4 1266 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 ATP5DP30049 168 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 SMC6Q96SB8 1091 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 PYCARDQ9ULZ3 195 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 UHRF1BP1LA0JNW5 1464 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 HOXC9P31274 260 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 APPBP2Q92624 585 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 EYA2O00167 538 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 CNNM4Q6P4Q7 775 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 KCNK9Q9NPC2 374 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 WWC3Q9ULE0 1092 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 SAMM50Q9Y512 469 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 PSDA5PKW4 1024 aaPredicted RBP14.41□□□□□ -0.1
COL3A1-201ENST00000304636 MAP3K9P80192 1104 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 GSTA5Q7RTV2 222 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 NFATC2IPQ8NCF5 419 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 ZCRB1Q8TBF4 217 aaKnown RBP14.41□□□□□ -0.1
COL3A1-201ENST00000304636 KIAA1524Q8TCG1 905 aa14.41□□□□□ -0.1
COL3A1-201ENST00000304636 FERMT1Q9BQL6 677 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms