RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 RBM5P52756 815 aaKnown RBP eCLIP18.46■□□□□ 0.55
UBXN1-202ENST00000301935 FAM205AQ6ZU69 1335 aa18.46■□□□□ 0.55
UBXN1-202ENST00000301935 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
UBXN1-202ENST00000301935 RASA3Q14644 834 aa18.45■□□□□ 0.54
UBXN1-202ENST00000301935 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
UBXN1-202ENST00000301935 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
UBXN1-202ENST00000301935 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
UBXN1-202ENST00000301935 USP2O75604 605 aaPredicted RBP18.44■□□□□ 0.54
UBXN1-202ENST00000301935 GJA5P36382 358 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 TNFAIP1Q13829 316 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 UBE4AQ14139 1066 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 PUM3Q15397 648 aaKnown RBP18.44■□□□□ 0.54
UBXN1-202ENST00000301935 SPDYE2Q495Y8 402 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 TNNI3KQ59H18 835 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 OTOP1Q7RTM1 612 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 ANKRD13AQ8IZ07 590 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 TDRD7Q8NHU6 1098 aaKnown RBP18.44■□□□□ 0.54
UBXN1-202ENST00000301935 IL1RAPL2Q9NP60 686 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 FPGT-TNNI3KV9GXZ4 949 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 CENPFP49454 3210 aa18.44■□□□□ 0.54
UBXN1-202ENST00000301935 AACSQ86V21 672 aa18.43■□□□□ 0.54
UBXN1-202ENST00000301935 LPIN2Q92539 896 aa18.43■□□□□ 0.54
UBXN1-202ENST00000301935 SERPINA10Q9UK55 444 aa18.43■□□□□ 0.54
UBXN1-202ENST00000301935 TTF2Q9UNY4 1162 aaKnown RBP18.43■□□□□ 0.54
UBXN1-202ENST00000301935 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
UBXN1-202ENST00000301935 HIBADHP31937 336 aaKnown RBP18.42■□□□□ 0.54
UBXN1-202ENST00000301935 GYG1P46976 350 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 CRHR2Q13324 411 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 ATP2B3Q16720 1220 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 ERO1AQ96HE7 468 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
UBXN1-202ENST00000301935 STAP2Q9UGK3 403 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 BRCA2P51587 3418 aa18.42■□□□□ 0.54
UBXN1-202ENST00000301935 MKI67P46013 3256 aaKnown RBP18.41■□□□□ 0.54
UBXN1-202ENST00000301935 TESPA1A2RU30 521 aaPredicted RBP18.41■□□□□ 0.54
UBXN1-202ENST00000301935 SLC5A1P13866 664 aa18.41■□□□□ 0.54
UBXN1-202ENST00000301935 OTUD7BQ6GQQ9 843 aa18.41■□□□□ 0.54
UBXN1-202ENST00000301935 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
UBXN1-202ENST00000301935 FAM84BQ96KN1 310 aaPredicted RBP18.41■□□□□ 0.54
UBXN1-202ENST00000301935 TDRD3Q9H7E2 651 aaKnown RBP18.41■□□□□ 0.54
UBXN1-202ENST00000301935 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
UBXN1-202ENST00000301935 A0A1B0GUL7 405 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 ERC2O15083 957 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 MX1P20591 662 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 FGFR2P21802 821 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 PLEKHM2Q8IWE5 1019 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 CD99L2Q8TCZ2 262 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 OPTNQ96CV9 577 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 TEPSINQ96N21 525 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 NEUROD6Q96NK8 337 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 PTPN18Q99952 460 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
UBXN1-202ENST00000301935 PDE4AP27815 886 aa18.39■□□□□ 0.53
UBXN1-202ENST00000301935 CRKP46108 304 aa18.39■□□□□ 0.53
UBXN1-202ENST00000301935 GORABQ5T7V8 394 aa18.39■□□□□ 0.53
UBXN1-202ENST00000301935 CDAN1Q8IWY9 1227 aa18.39■□□□□ 0.53
UBXN1-202ENST00000301935 PTPN22Q9Y2R2 807 aa18.39■□□□□ 0.53
UBXN1-202ENST00000301935 PDE1AP54750 535 aa18.38■□□□□ 0.53
UBXN1-202ENST00000301935 TIMM10P62072 90 aa18.38■□□□□ 0.53
UBXN1-202ENST00000301935 CCDC158Q5M9N0 1113 aa18.38■□□□□ 0.53
UBXN1-202ENST00000301935 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
UBXN1-202ENST00000301935 SALL3Q9BXA9 1300 aa18.38■□□□□ 0.53
UBXN1-202ENST00000301935 POTEFA5A3E0 1075 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 GLRX3O76003 335 aaKnown RBP18.37■□□□□ 0.53
UBXN1-202ENST00000301935 TNNI2P48788 182 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 RGS3P49796 1198 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 SP3Q02447 781 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
UBXN1-202ENST00000301935 MS4A4AQ96JQ5 239 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 TMEM39BQ9GZU3 492 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
UBXN1-202ENST00000301935 EFCC1Q9HA90 598 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 MYH13Q9UKX3 1938 aa18.37■□□□□ 0.53
UBXN1-202ENST00000301935 ZBTB22O15209 634 aa18.36■□□□□ 0.53
UBXN1-202ENST00000301935 VGLL4Q14135 290 aa18.36■□□□□ 0.53
UBXN1-202ENST00000301935 CAVIN4Q5BKX8 364 aa18.36■□□□□ 0.53
UBXN1-202ENST00000301935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.36■□□□□ 0.534e-9■□□□□ 9
UBXN1-202ENST00000301935 XAGE2Q96GT9 111 aa18.36■□□□□ 0.53
UBXN1-202ENST00000301935 ZNF512BQ96KM6 892 aaPredicted RBP18.36■□□□□ 0.53
UBXN1-202ENST00000301935 DBNLQ9UJU6 430 aaKnown RBP18.36■□□□□ 0.53
UBXN1-202ENST00000301935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.36■□□□□ 0.53
UBXN1-202ENST00000301935 UQCRFS1P1P0C7P4 283 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 ATP5JP18859 108 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 CAP1Q01518 475 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 GRIK5Q16478 980 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 FBXO33Q7Z6M2 555 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 VPS37DQ86XT2 251 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBXN1-202ENST00000301935 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 BRI3BPQ8WY22 251 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 ARMC5Q96C12 935 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
UBXN1-202ENST00000301935 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
UBXN1-202ENST00000301935 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
UBXN1-202ENST00000301935 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
UBXN1-202ENST00000301935 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms