RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 USP40Q9NVE5 1235 aa22.28■■□□□ 1.16
SPSB3-201ENST00000301717 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-201ENST00000301717 MROH7-TTC4A0A0A0MT08 1334 aa22.27■■□□□ 1.16
SPSB3-201ENST00000301717 BTDP43251 543 aa22.27■■□□□ 1.16
SPSB3-201ENST00000301717 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
SPSB3-201ENST00000301717 TCP10Q12799 353 aa22.26■■□□□ 1.15
SPSB3-201ENST00000301717 TMOD2Q9NZR1 351 aa22.26■■□□□ 1.15
SPSB3-201ENST00000301717 PPP2R3BQ9Y5P8 575 aa22.26■■□□□ 1.15
SPSB3-201ENST00000301717 NF2P35240 595 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 TNFAIP1Q13829 316 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 RGMBQ6NW40 437 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 ADGRA1Q86SQ6 560 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 ZFPM1Q8IX07 1006 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 DNAJC2Q99543 621 aaKnown RBP22.25■■□□□ 1.15
SPSB3-201ENST00000301717 FAM198AQ9UFP1 575 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 ANGEL1Q9UNK9 670 aaKnown RBP22.25■■□□□ 1.15
SPSB3-201ENST00000301717 PAPPA2Q9BXP8 1791 aa22.25■■□□□ 1.15
SPSB3-201ENST00000301717 ZNF157P51786 506 aaPredicted RBP22.24■■□□□ 1.15
SPSB3-201ENST00000301717 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
SPSB3-201ENST00000301717 MYH2Q9UKX2 1941 aa22.24■■□□□ 1.15
SPSB3-201ENST00000301717 IDH1O75874 414 aaKnown RBP22.23■■□□□ 1.15
SPSB3-201ENST00000301717 TNNI2P48788 182 aa22.23■■□□□ 1.15
SPSB3-201ENST00000301717 OTUD7AQ8TE49 926 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-201ENST00000301717 FAM163AQ96GL9 167 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-201ENST00000301717 HHIPL1Q96JK4 782 aa22.23■■□□□ 1.15
SPSB3-201ENST00000301717 FAM155AB1AL88 458 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-201ENST00000301717 ECE1P42892 770 aa22.23■■□□□ 1.15
SPSB3-201ENST00000301717 RHBDL3P58872 404 aa22.23■■□□□ 1.15
SPSB3-201ENST00000301717 FKBP1BP68106 108 aa22.23■■□□□ 1.15
SPSB3-201ENST00000301717 DDX4Q9NQI0 724 aaKnown RBP22.23■■□□□ 1.15
SPSB3-201ENST00000301717 GPR75-ASB3A0A0A6YYF3 556 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 GOLIM4O00461 696 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 WDHD1O75717 1129 aaPredicted RBP22.22■■□□□ 1.15
SPSB3-201ENST00000301717 PICALMQ13492 652 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 SUPT20HL1Q3ZLR7 823 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 NAA16Q6N069 864 aaPredicted RBP22.22■■□□□ 1.15
SPSB3-201ENST00000301717 RASAL3Q86YV0 1011 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 SLF2Q8IX21 1173 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 CLMNQ96JQ2 1002 aa22.22■■□□□ 1.15
SPSB3-201ENST00000301717 MYO5AQ9Y4I1 1855 aaKnown RBP22.21■■□□□ 1.15
SPSB3-201ENST00000301717 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 USP2O75604 605 aaPredicted RBP22.21■■□□□ 1.15
SPSB3-201ENST00000301717 HSPA1AP0DMV8 641 aaKnown RBP22.21■■□□□ 1.15
SPSB3-201ENST00000301717 HSPA1BP0DMV9 641 aaKnown RBP22.21■■□□□ 1.15
SPSB3-201ENST00000301717 SLURP2P0DP57 97 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 RGS3P49796 1198 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 GSTO1P78417 241 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 MKRN3Q13064 507 aaKnown RBP22.21■■□□□ 1.15
SPSB3-201ENST00000301717 FKBP1CQ5VVH2 108 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 ARMC9Q7Z3E5 817 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 FAM83AQ86UY5 434 aa22.21■■□□□ 1.15
SPSB3-201ENST00000301717 IGHDP01880 384 aa22.2■■□□□ 1.14
SPSB3-201ENST00000301717 HDAC1Q13547 482 aaPredicted RBP22.2■■□□□ 1.14
SPSB3-201ENST00000301717 SH3RF3Q8TEJ3 882 aaPredicted RBP22.2■■□□□ 1.14
SPSB3-201ENST00000301717 FAM151AQ8WW52 585 aa22.2■■□□□ 1.14
SPSB3-201ENST00000301717 AATFQ9NY61 560 aaKnown RBP eCLIP22.2■■□□□ 1.14
SPSB3-201ENST00000301717 LDHCP07864 332 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 SLC10A3P09131 477 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 ATP5JP18859 108 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 DYNLL1P63167 89 aaKnown RBP22.19■■□□□ 1.14
SPSB3-201ENST00000301717 SLFNL1Q499Z3 407 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 LDLRAD1Q5T700 205 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 SH3BP5LQ7L8J4 393 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 MAGEB6Q8N7X4 407 aa22.19■■□□□ 1.14
SPSB3-201ENST00000301717 PPP1R12BO60237 982 aaPredicted RBP22.18■■□□□ 1.14
SPSB3-201ENST00000301717 CHGBP05060 677 aa22.18■■□□□ 1.14
SPSB3-201ENST00000301717 CYP7A1P22680 504 aa22.18■■□□□ 1.14
SPSB3-201ENST00000301717 MIGA2Q7L4E1 593 aa22.18■■□□□ 1.14
SPSB3-201ENST00000301717 MIGA1Q8NAN2 632 aa22.18■■□□□ 1.14
SPSB3-201ENST00000301717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.18■■□□□ 1.14
SPSB3-201ENST00000301717 MAST2Q6P0Q8 1798 aa22.17■■□□□ 1.14
SPSB3-201ENST00000301717 KIF23Q02241 960 aaPredicted RBP22.17■■□□□ 1.14
SPSB3-201ENST00000301717 ANKRD45Q5TZF3 282 aa22.17■■□□□ 1.14
SPSB3-201ENST00000301717 IDI2Q9BXS1 227 aa22.17■■□□□ 1.14
SPSB3-201ENST00000301717 THSD7BQ9C0I4 1608 aa22.17■■□□□ 1.14
SPSB3-201ENST00000301717 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
SPSB3-201ENST00000301717 TEX11Q8IYF3 940 aa22.16■■□□□ 1.14
SPSB3-201ENST00000301717 HAUS7Q99871 368 aa22.16■■□□□ 1.14
SPSB3-201ENST00000301717 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
SPSB3-201ENST00000301717 PAG1Q9NWQ8 432 aa22.16■■□□□ 1.14
SPSB3-201ENST00000301717 DDTLA6NHG4 134 aaPredicted RBP22.15■■□□□ 1.14
SPSB3-201ENST00000301717 NOGQ13253 232 aa22.15■■□□□ 1.14
SPSB3-201ENST00000301717 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
SPSB3-201ENST00000301717 WBP1LQ9NX94 342 aa22.15■■□□□ 1.14
SPSB3-201ENST00000301717 FOXN1O15353 648 aa22.14■■□□□ 1.14
SPSB3-201ENST00000301717 MAP4K4O95819 1239 aaPredicted RBP22.14■■□□□ 1.14
SPSB3-201ENST00000301717 IREB2P48200 963 aaKnown RBP22.14■■□□□ 1.14
SPSB3-201ENST00000301717 MAP3K12Q12852 859 aa22.14■■□□□ 1.14
SPSB3-201ENST00000301717 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.14
SPSB3-201ENST00000301717 ZSCAN29Q8IWY8 852 aaPredicted RBP22.14■■□□□ 1.14
SPSB3-201ENST00000301717 RPAP1Q9BWH6 1393 aaPredicted RBP22.14■■□□□ 1.14
SPSB3-201ENST00000301717 PDE6AP16499 860 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 MAP2K2P36507 400 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 AAMPQ13685 434 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 SLC9C2Q5TAH2 1124 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.14■■□□□ 1.13
SPSB3-201ENST00000301717 CNKSR2Q8WXI2 1034 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 ELP3Q9H9T3 547 aa22.14■■□□□ 1.13
SPSB3-201ENST00000301717 TSKSQ9UJT2 592 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms