RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TACC3Q9Y6A5 838 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 MSH6P52701 1360 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
GCN1-201ENST00000300648 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
GCN1-201ENST00000300648 SDSP20132 328 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 GBP5Q96PP8 586 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 KIF1BO60333 1816 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 CRCPO75575 148 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 SNRPA1P09661 255 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 PDE1AP54750 535 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 SERPINA10Q9UK55 444 aa12.62□□□□□ -0.39
GCN1-201ENST00000300648 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
GCN1-201ENST00000300648 FLOT1O75955 427 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
GCN1-201ENST00000300648 AFMP43652 599 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 ITIH3Q06033 890 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 CABS1Q96KC9 395 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
GCN1-201ENST00000300648 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 DENND2CQ68D51 928 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 BRF1Q92994 677 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 LZTFL1Q9NQ48 299 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 IFNKQ9P0W0 207 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 ZNF445P59923 1031 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 MCM10Q7L590 875 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 TRIM37O94972 964 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 HAUS3Q68CZ6 603 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 MLKLQ8NB16 471 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
GCN1-201ENST00000300648 RNF40O75150 1001 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 NPC1L1Q9UHC9 1359 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 STX10O60499 249 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 PTGS1P23219 599 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 NAPAP54920 295 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 SYT10Q6XYQ8 523 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 TMOD4Q9NZQ9 345 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 WDR44Q5JSH3 913 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 CCDC117Q8IWD4 279 aaPredicted RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 CCDC8Q9H0W5 538 aaPredicted RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 RBM8AQ9Y5S9 174 aaKnown RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 EXOC5O00471 708 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 CALUO43852 315 aaPredicted RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 HSPA1LP34931 641 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 SMTNP53814 917 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 ST5P78524 1137 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 SLC9C1Q4G0N8 1177 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
GCN1-201ENST00000300648 RUNDC3BQ96NL0 473 aa12.6□□□□□ -0.39
GCN1-201ENST00000300648 HIP1RO75146 1068 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 DHX32Q7L7V1 743 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 A2MP01023 1474 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 TNRQ92752 1358 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 GNA14O95837 355 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 Q6ZUG5 572 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 EXOC7Q9UPT5 735 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 PSMD1Q99460 953 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 E7EVH7 732 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 PPM1FP49593 454 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms